Coregonus clupeaformis (lake whitefish): 121571275 Help Entry 121571275         CDS       T08357                                  Name (RefSeq) collagen alpha-6(IV) chain   KO K06237   collagen type IV alpha Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04382   Cornified envelope formation cclu04510   Focal adhesion cclu04512   ECM-receptor interaction cclu04518   Integrin signaling cclu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cclu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     121571275    04518 Integrin signaling     121571275  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     121571275   09142 Cell motility    04820 Cytoskeleton in muscle cells     121571275  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     121571275  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cclu04147]     121571275    00536 Glycosaminoglycan binding proteins [BR:cclu00536]     121571275 Exosome [BR:cclu04147]  Exosomal proteins   Exosomal proteins of other cancer cells    121571275 Glycosaminoglycan binding proteins [BR:cclu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    121571275 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  121571275 NCBI-ProteinID:  XP_041738578 LinkDB All DBs Position 8:complement(55851467..55957118) Genome browser AA seq 1634 aa AA seqDB search MGVPGFPGTDGVPGHPGADGGRGLAGADGCNGTQGDPGPRALDGGMPGAPGLSGPTGPKG QKGEPVYVGLSGGVPGRPGPDGVPGPRGPDGGPGDFGPRGPDGFLGAPGPPGPPGPVGSP SLGFQGEPGDKGDAGQPGPRGVPGDEPLVGATVTTIYKGAKGDVGPQGDPGRPLVSGVVE FVGFPKGDKGTKGEGGYKGVRGPTGRPGPPGPFGYPGEVGENGILGYPGGRGPPGFNGPP GSQGRQGFIGSPGFPGQPGYRGPKGEQGEQGPPGPPIYTDAQGMSVQGAPGDNGINGLPG QPGDAGAPGFPGQPGRPGDSFGDGRRGSPGFPGTQGPKGERGNPGRQGYGPEGQPGGQGL PGTPGPPGPPGRSANIQTDLFNNLPGTPGRPGAQGPPGASGYKGPKGELGDCNCLGEGTS GGVGALGAPGADGRPGGSGRKGESGDPGIPGFGGQPGTPGRAGERGFFGRKGEKGASFYP SFSRGIKGELGAQGPRGPPGDMGRPGRDGLPGFPGQPGPPADVDGYGSVGERGFPGFSGA KGRAGEPGESGIGYEGDVGTRGLPGDPGFSGLPGQPGLPGPPGDSCGQEGVNDAEGGLTV PCRLSGEDGEPGYPGIPGRPGSKGEPGFPGGPGRPGFDGGKGERGDPGFGGRPGPQGFPG PRGDAGVPGIPGEGRPGAPGKNGLPGRPGEKGQPGQVLGASIGLPGSPGFPGGPGDKGER GASGLPGGSGFDGRSGVPGAKGERGTDGYPGTPGLPGLPGEGRLGGFPGPAGPPGRKGLT GSPGCQGYPGVKGARGDAGFPGPAGMKGQPGEPGGDGPPGLRDLPGPPGPGGRDGIPGGP GRKGESGYPGLVGFPGMPGNPGRPGGPGGKGAPGFSGREGLPGDFGAPGPKGDRGDTGLP GAPSLPVRVEYIEKGQRGDNGANGLPGFPGPRGDKGFPGQPGRQGLPGLPGYADRAKGEP GLPGLPGRPAGPGYPGPKGSPGIIGFPGMPGPRGDDGEPGFPGNPGVPGQPGAKGERGDS SGYPGGPGAKGEAGTPGYSGGPGAKGAPGDNGFPGGPGFSGQKGALGDSGRPGLTGTPGF TGGKGLNGYPGGRGLDGTPGRPGSPGTSGEKGLPGSPGLDGLNGLAGPKGLPGTPGYSEG GRPGTPGVAGLKGERGSSIPGGPGYNGEKGARGESGGPGMTGFPGLPGPRGETVDSNIPG PLGNPGLPGIDGEQGYRGPPGPPGPPGPGTTQGDRGDAGLSGIPGTPGNRGDPGGPGGIG RDGNPGFKGARGDSGYSGASGQKGFPGDPGYYGGKGPKGRRGNYGKKGPPGIIFPGPNIQ ITYGDMGGPGANGAPGAVGEPGNPGMPGRAGPKGRPGGVGKLGRNGGSGLDGPLGGSGPP GFPGPTGSQGLPGKPGLQGPPGSVARSRSIGYTLVKHSQNNQVPMCPQGMAQLWEGYSLL YVEGQEKAHNQDLGMAGSCLTRFSTVPFLYCTPNEICYYASRNDKSFWLSTTAPIPMMPV GEEAISQYISRCSVCEAYSQAVAVHSQDLTIPTCPAGWRSLWIGYSFLMHTAAGAEGGGQ SLVSPGSCLEDFRATPFIECNGAKGTCHYFANKYSFWLTTVEPNREFDPPPMDTLKGGNQ RSRVSRCQVCSKIL NT seq 4905 nt NT seq  +upstreamnt  +downstreamnt atgggcgtaccagggttcccaggaaccgacggagtcccaggtcacccaggtgcggacggt ggcaggggtctagcgggtgcagacgggtgtaacggtacccagggagacccaggtcccaga gctctagatggaggaatgcctggagctccaggactctctgggcctacaggtcctaaagga cagaagggagagcctgtatacgttggactcagtgggggagttcctggtcggcctggaccg gatggtgtacctggtcctagaggtccagacggaggtcccggtgacttcggccccagaggt cctgatggattccttggtgctccaggcccccccggtccccctggccctgtagggagcccc agtctagggtttcagggggagccaggagacaagggcgacgcaggtcagccaggaccccga ggcgtgcccggcgacgagccgctagtaggcgcaactgttaccactatctacaaaggagct aagggcgatgtgggcccgcagggagacccaggcaggcccttggtcagtggagtggtggag tttgtgggctttcctaaaggagacaaaggaacaaagggggaagggggttacaaaggagtg cgtggaccaactggtagacctggcccacctggtccttttggctatcctggcgaggtggga gagaatggaattttggggtatccaggggggcggggtcctcctggttttaacgggcctccc ggatctcaaggaagacagggattcataggaagtccagggttccccggccaaccaggctac agaggacctaagggcgaacagggagaacaggggcctcccggacccccaatctacactgac gcacaagggatgtctgttcaaggagcaccaggtgacaacggtatcaacggcctccccggt caaccaggtgatgcaggagctccagggtttccaggacaaccaggacgaccaggcgactcc ttcggcgatggtcgcagaggtagcccagggttccctggtacccaggggcctaagggagag aggggtaacccaggcagacagggctatggtcctgagggccaaccaggaggacaaggctta ccaggaacccccggaccacccggaccaccaggcagatctgccaacatccaaactgacttg ttcaacaatctaccaggaacgccaggacgaccaggagcccagggaccacctggagccagt ggatataagggacccaaaggggagctgggtgactgtaactgcctgggagaaggcacctcg ggtggggtgggggcactgggtgctcctggggctgatggaagacctggggggtcaggacgt aaaggcgagagcggagaccctggcatacctggtttcggaggacaaccaggaacacctggt cgtgcgggtgagaggggtttcttcgggcgtaaaggagagaagggtgcttccttctacccg tcgttcagccgggggatcaagggtgaactgggggcccagggccctcggggcccccctgga gacatgggccgacccgggagagatggactgcctggcttccctggacagcctgggcctcct gctgatgtcgatggctacggatccgtcggagagagaggtttcccagggttctcaggggcc aaaggtcgcgcgggtgaaccaggagagagtgggattggctacgagggtgacgtcggtacc cgcgggttgccaggcgacccgggcttctccgggttaccagggcaacctggtttgcctggc ccgccaggtgacagctgtgggcaggagggggttaatgacgcagagggagggttgacggtc ccttgtcgtctatctggcgaggatggagaacccggctacccaggaatacctggaagacca ggttccaagggcgagccaggtttcccagggggtcccggtcggcccggctttgatggaggg aaaggagagagaggagaccctggcttcggaggtcggcctggaccacaaggattccctggc cccagaggagatgcgggggtcccaggtatcccaggcgagggccgtccaggggccccaggg aagaacgggctcccggggcgaccgggggaaaaggggcagccggggcaggtgctgggggcc tcaatagggctccctggatcacctgggttccctggaggaccaggagacaagggagagcga ggagcgtcgggactacctggaggatcaggttttgacggacggtccggtgttcccggagct aagggcgagcgcggtacagatggctaccccggaacgccaggtcttcccggacttcctgga gagggcagactgggtggatttcccggtcctgccggaccacccggaaggaaaggattaacc ggatctccaggctgtcaaggctaccccggtgtgaagggagccagaggtgacgcaggcttc ccaggcccagctgggatgaagggacaaccaggagaaccaggaggcgatggccctccagga ctcagggatcttccaggaccaccgggccccgggggaagagacggcatccctgggggacca ggaagaaagggcgagagcggttaccccggactggtgggtttccccggaatgccaggtaac cctggaagacctggtggtccaggagggaaaggagctcctggattctcaggaagagaaggt ctgcccggagacttcggagcaccaggacctaaaggtgacagaggtgacactggtctcccc ggcgcaccctctctgcccgtcagagttgagtacattgagaagggacagaggggcgacaat ggtgccaacggtctacccggtttccctggacctagaggtgacaagggtttcccagggcag cctggtcgtcagggattgcccgggctgcctggttatgctgacagggctaaaggagaacca ggacttcctggtctccctggacgcccagccgggccaggctacccaggacctaaaggatct cccggtattatcggcttccctggcatgcctggacctaggggtgacgatggcgaacctggc ttccctggaaaccctggagtccctggtcagccaggtgctaaaggtgagagaggtgactcg tccggctaccccggtggtccgggagctaaaggtgaggccggaacccctggttactcaggt ggcccaggtgctaaaggcgcccccggggacaacggtttcccaggcggccctgggttcagc ggacagaagggagcactgggagattcaggaagacccggactcacgggtacccctggtttc actggcggtaagggtctgaacggatacccaggaggaagaggtctagatgggacgcctggc cgccccggctcccctggaacatctggagagaaaggtctgccaggatctcctggtcttgat gggctcaacggactggctggacccaagggtctaccaggaaccccaggttatagtgagggg ggtcgtcccggcacccctggcgtggctggtctgaagggagagaggggctcctccatccca ggaggacctgggtacaatggagagaagggagctagaggagagtcagggggtcctggtatg acgggcttcccaggtctgcctggtcctcgcggggagacggtcgattctaacatccctgga ccactgggaaaccctggcctgcctggaatcgatggagaacaaggttaccgtggtcctcca ggccccccaggcccacctgggcccggtacaacccagggagacagaggcgacgctgggcta tctggcatccctggtacccctggtaaccgtggagaccctgggggtccaggtggcatagga cgggacggaaaccctggattcaaaggagcgagaggtgactctgggtacagtggagcatca ggacaaaagggcttccctggagatccaggatactatggagggaaaggacccaaaggaagg agaggtaattatggtaaaaagggacccccaggtataattttccccgggccgaacatccag ataacctatggagacatgggaggccccggggccaacggagctccaggggccgtgggagaa ccaggcaatcccggcatgccaggcagagctggtcctaaaggcaggcctggtggggtgggg aagctggggaggaacggagggtcaggtctggatggacctctgggaggctctggtcctcct ggtttccctggacctaccgggtcacaaggtctgcccggtaagcccggcctgcagggtccc ccaggtagtgtggcacgcagcaggagtattggctacactctggtgaagcacagtcagaac aaccaggtgcccatgtgtcctcagggcatggctcagctctgggaaggatacagtctgctg tatgtggaggggcaagagaaggcccataaccaggacctcggtatggcgggctcctgcctt acccgtttcagcactgtccccttcctgtactgcacgcccaacgagatctgctattacgcc agccgcaatgacaagtccttttggctgtccaccacggcgcccatccccatgatgccggta ggagaggaggccatcagccagtacatcagcaggtgctccgtgtgcgaggcctactcccag gctgtagctgtccactcacaggacctcaccatccccacctgccctgccggctggaggtcc ctctggatcgggtactccttcctcatgcacactgctgccggggctgagggcggcggccag tccctggtatctccagggtcctgtcttgaagacttccgcgccacgcccttcatcgagtgt aacggggccaagggcacctgccactactttgccaacaagtacagcttctggctgaccacg gttgagcctaaccgggagttcgacccccctccgatggacacactgaagggaggcaaccaa cgcagccgagtcagtcgctgtcaagtctgcagcaagatcttgtag

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