Coregonus clupeaformis (lake whitefish): 121571282
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Entry
121571282 CDS
T08357
Symbol
hmgb3a
Name
(RefSeq) high mobility group protein B3a
KO
K11296
high mobility group protein B3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121571282 (hmgb3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121571282 (hmgb3a)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
121571282 (hmgb3a)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121571282 (hmgb3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
Toxin_20
Motif
Other DBs
NCBI-GeneID:
121571282
NCBI-ProteinID:
XP_041738602
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All DBs
Position
8:complement(55535625..55544874)
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AA seq
209 aa
AA seq
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MAKGTPGKPKGKMSAYAYFVQTCREEHKKKSPEIPVNFAEFSKKCSGRWKTMSGKEKGKF
EDMAKQDKVRYDNEMMHFAPGGKKGRKKDPNAPKRPPSGFFIFCADHRPKIKAQHPSLGI
GDVAKKLGEQWNNLTDATKQPYLIKANKLKDKYQKDVADYKSGKGKVGAPSMVMAPKPTM
KSNMDDDDDDDDEEDEEEEEEEDEEEDDE
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggcacccccgggaagcccaaaggcaagatgtctgcctacgcctacttcgtt
cagacctgccgggaggagcacaagaagaagagtccagagatacctgtcaactttgctgag
ttctccaagaagtgctccggacgatggaagacgatgtctggtaaggagaaggggaagttt
gaggacatggcgaagcaggataaggtgcgctatgacaacgagatgatgcactttgcccct
ggcggcaagaagggaaggaagaaggaccccaatgcaccaaagaggcccccatctggtttc
ttcatcttctgtgcggaccaccggcccaagatcaaggctcagcaccccagcctggggata
ggggacgtggccaagaaactgggcgagcagtggaacaaccttactgatgccactaaacag
ccctacctgatcaaggccaacaaactcaaagacaagtaccagaaggacgttgctgactat
aagtccggtaaggggaaggtgggtgctccgagcatggtgatggcccctaaacccacgatg
aagagtaatatggatgacgatgatgatgatgacgatgaggaagatgaggaggaggaggag
gaggaggatgaggaggaggatgacgagtag
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