Coregonus clupeaformis (lake whitefish): 121571299
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Entry
121571299 CDS
T08357
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121571299
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121571299
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121571299
NCBI-ProteinID:
XP_041738627
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All DBs
Position
8:54688657..54693672
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AA seq
295 aa
AA seq
DB search
MYSMMEHELKPSGQQQSHQTAMSPVTGNNIGNSHPGSKSLCPPGGDPMDKVKRPMNAFMV
WSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKDYPDYKY
KPRRKTKPLLKKDNQMGKYPLSAGNLLAAAAAQGQGGSPRMESYGWGPAGGYAGMQSEAL
GYTQQLHRYDLSALQYPQAMTAAQTYMNGANTYSPMSYSSSHQQPSPVMSMVKPEPVSHS
PTGGPNHHRGPLQGDLRDMISMYIPGGDTSDPAAQRGGYSVQQHYLSGTVPLTHI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatggaacacgagttaaagccctctgggcaacagcagtcgcaccaaacc
gccatgtctccggtcaccggcaacaacattggcaactctcacccggggtccaaatccctg
tgtcctccgggcggggaccccatggacaaggtcaaaagacccatgaacgccttcatggtc
tggtctaggggccagcgtcgcaagatggcccaggagaaccccaagatgcacaactccgag
atcagcaagcggctgggcgcggagtggaagctactgactgatgctgagaagcggccgttc
attgacgaagccaagcgcctcagggcggtgcacatgaaggattaccccgactacaagtac
aagccacgccgtaaaaccaagcccctgctcaaaaaggacaaccaaatggggaagtaccct
ctctccgccgggaacctgctggccgcggccgccgcgcagggccaaggtgggagtcccagg
atggagagttacgggtggggcccggcgggaggttacgccgggatgcagagcgaggccctt
ggctacactcagcagctgcaccgctacgacctgtccgcgctccagtacccccaggccatg
accgcagcacagacgtatatgaacggcgccaacacctacagccccatgtcctacagcagc
agccaccagcagcccagcccagtcatgtccatggtgaagccagagccggtgtcgcactcc
ccgaccggtggacctaaccaccaccgcgggcctctccagggggatttgagggatatgatc
agtatgtacatccccgggggagacaccagtgaccctgccgcccagagaggaggctacagc
gtccagcaacactatctcagtgggactgtccccctcactcatatctag
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