KEGG   Coregonus clupeaformis (lake whitefish): 121571307
Entry
121571307         CDS       T08357                                 
Name
(RefSeq) dynactin subunit 1 isoform X1
  KO
K04648  dynactin 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04814  Motor proteins
cclu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    121571307
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121571307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121571307
   03036 Chromosome and associated proteins [BR:cclu03036]
    121571307
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cclu04812]
    121571307
Membrane trafficking [BR:cclu04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    121571307
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Dynactin complex
     121571307
Cytoskeleton proteins [BR:cclu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dynactins
     121571307
SSDB
Motif
Pfam: Dynactin CAP_GLY
Other DBs
NCBI-GeneID: 121571307
NCBI-ProteinID: XP_041738638
LinkDB
Position
8:complement(54403023..54433964)
AA seq 1256 aa
MSADGGGKPAKVGSVVEVIGKGQRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGKR
YFHCDENCGIFVRQSQIQLVEDGSSGTSPDTPEAATAKFLPKQKDIPETPKSVKQMPIPK
KSVTCRSTKTPRVLATPASGLSSSLSREDVSEGSLSSKGALGAPVVPLPSGTPATPGAPP
PATPSKAEPPVSKQEEESLRGQVKDLEEKLETLMMKRAEDKVKLKELEKYKIQLEQLQEW
KTKMQEQQADLQKQLKEAKKDAREALESKDRYMEEMSDTADAIEMATLDKEMAEERSESL
QVEVESLKEKLEELTMDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRLKEALVRMRDLS
SSEKQEHVKLQKQMEKKNGELETLRTQKEKLQEEMKQAEATIDELKEQVDAALGAEEMVE
TLTERNLDLEEKVRELRETVTDLEAINEMNDELQENSRETEMELREQLDLNGARVREAQK
RVEAAQETVADYQQTINKYRELTTSLQDTNRELTSAQNANTEQVQQPPAELFDFKIKFAE
TKAYAKAIEMELRKMEVGQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAEL
ISKQAQEKFDLNGNPVERTGIKMRGPPGEQLSFASGLVYSLTLLQATLHKYEQALNCCSV
EVYKRMGTLYSEMSVHERSLDFFIDLLHKDQLDETVHVEPLTKAIKYYQQLYSIHLAEQT
EDCTVQLADHIKFIQSALDCMGAEVVRLRAFLQPGQEGADLNILLKDLDTSCSDIKQFCK
KIRRRMPGTDVPGVPAALAFGAPVSETLTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQE
GLNTLKLEDVAFKAVEQVYGSHGLNPHECLRQSCSSVISTMNKMATAMQEGEYDAERPQG
KTPPVEARAAALRAEITDSEGLGVKLEDRDTVIKELKKSLKIKGEELSEAHVRLSLLEKK
LDTSTKDADERVEKIQTRLDETLALLKKKEKEFEETMDALQADIDQLEAEKAALNQRLSN
QSKVTIEGLRASPASGIASIVTGTTGAGVAPGAGGLSGPMQVVDSPLLRQQVETQRLGIK
HLKNENNRLKAEKMRAQLASLPPLHVPKLPLREASSSPPAEGPLHGALYRKTDQLLGTLL
KMSAAVKVVDITGKTPVSASAQLLDQTARLQSLSNALDKLKGEVSEHVVSQHPGAKISSD
FATFPISSFVKAKEEKQGGTVFVGRVAIPCAKGQEQVHRLVLSQQHLQQVHRLLMT
NT seq 3771 nt   +upstreamnt  +downstreamnt
atgagtgcagacgggggcggcaagcctgccaaggtgggctcagtggtggaggtgatcggt
aagggccagcgtggcaccgtggcttacgtgggcgccacgctcttcgccacgggcaagtgg
gtgggcgtgatccttgacgagcccaagggcaagaacgacggcacggtccaggggaagaga
tactttcactgcgatgagaactgtggtatctttgtgcgccagtcccagatccagctagta
gaagatggatccagtggcacctctccagacaccccagaagctgcaactgccaagttcctg
cccaagcagaaagacattcctgagactccgaaatcagtcaaacagatgcccattcccaaa
aagtccgtaacctgccgtagtaccaagaccccccgagtcttagccacccccgcctctggt
ctgtccagctctctgtccagggaggatgtcagtgagggcagcctgtcttccaagggtgca
ctgggggctcccgtggtccccctgcccagcggcactcccgccacgcccggagctcctccc
cctgccacccctagcaaggcagagcctcccgtatcgaagcaggaggaggagtctctgcga
ggtcaggtgaaggatctagaggagaagctggagaccctgatgatgaagcgggcggaggac
aaggtcaagctgaaggagctggagaaatacaagatccagctggagcagctgcaggagtgg
aagaccaagatgcaggagcagcaggccgacctccagaaacaactcaaagaggccaagaag
gatgctcgggaggccctggagtctaaagaccgctacatggaggagatgtcagacacggcg
gacgccatcgagatggccacactggacaaggagatggcagaggagcggtcggagagcctg
caggtggaggtggagtcactgaaggagaagttggaggagctcaccatggacctggagatc
atcaaacacgaggtcgaggagaaaggttctgatggagctgcctccagttatcatgtcaag
cagctggaggagcagaacagcagactgaaagaggctctggtcaggatgcgtgacctgtct
tcctctgagaagcaggagcatgtgaagctccagaagcagatggagaagaagaatggagag
ctggagacgctgaggacccagaaggagaaactacaggaggagatgaagcaggctgaggcc
accattgatgagctgaaggagcaggtggatgctgctctcggggcagaggagatggtggag
actctgactgagaggaatctggacctggaggagaaagtcagagagctcagagagactgtc
acagacctggaagcgatcaacgagatgaatgacgagctgcaggagaacagcagggaaacg
gagatggagctgagagagcagctggacctgaatggggccagggtgagagaggcccagaag
agggtggaggccgctcaggagactgtggctgactatcagcagaccatcaacaagtaccgc
gagctcaccaccagcctacaggataccaacagggagctgaccagcgctcagaatgccaac
acagagcaggtccaacagcctcctgctgagctgtttgacttcaagatcaagttcgctgag
accaaggcctacgccaaggccatcgagatggagctgaggaagatggaggtgggccaggcc
aacagacaggtgtctctcctcacctccttcatgcccgactctttcctgcgtcacggaggc
gaccacgactgtattctggtgctcttgctaataccaagactcatctgcaaggctgagttg
atcagtaagcaggcccaagagaagtttgatttgaatggtaacccagtggagaggactgga
attaagatgagaggaccacctggagaacaactcagcttcgcctctggactggtctactct
ctaaccctgctgcaggccacgctgcacaaatacgaacaagctcttaactgttgcagtgtg
gaggtgtataagcggatggggactctctactcagagatgagtgtccatgagcgttcccta
gacttctttatagatctgctgcacaaagaccagctggacgagactgtacacgtggagcct
ctcaccaaggccatcaagtactaccagcaactgtacagcatccacctggctgagcagact
gaggattgcaccgtgcagctggctgaccacatcaagttcatccagagtgctttggactgt
atgggtgctgaggtggtgcgtctcagggcgttcctgcagccggggcaggagggggctgac
ctgaacatcctgctgaaggacctagacacgtcctgcagcgacatcaaacagttctgcaag
aagatcagacgcaggatgccagggaccgacgtgccaggggtgcccgccgctctggccttt
ggcgcaccggtgtcagagactctaacggactgcaggcgtcagctgacgcgggtggttgcc
gtgctacaggaggtggcggctgcgggggcgcagatggttgcccctctaggggaacaggag
gggctcaacaccctcaaactggaggacgtggccttcaaggctgttgaacaggtgtatggg
tcccatggcctgaacccccatgagtgtctgcgtcagtcctgcagctctgtcatctccacc
atgaacaagatggctaccgccatgcaggagggagagtatgacgctgagagaccacaggga
aaaactcccccggtagaggctcgtgcggcggccctcagggcagagatcactgattcagag
ggtctgggagtcaaactggaggacagagacaccgtcatcaaggagctcaagaagtcccta
aagatcaagggagaggagttgagtgaggcccacgtccgtctcagcctgctagagaagaag
ctggatacgtccactaaagacgcagacgaacgcgtggagaagatccagaccagactggat
gagaccctggccctgctcaagaagaaggagaaggagtttgaggagaccatggacgccctg
caggcagacatcgaccagctggaggcagagaaggcggcgctgaatcagcgtctctccaac
caatcaaaggtgaccatcgagggcctcagggcctcgcctgcctctgggatcgcatccatc
gtcacgggaaccaccggagcgggtgttgccccaggagcagggggtctgtctgggccgatg
caggtggtggactcccctctcctccgtcagcaggtggagacacagagactgggcatcaaa
cacctgaagaacgagaacaacagactcaaggcagagaagatgagagcccagctagcctcc
ctccctcccctccatgtccccaagcttcctctgagagaggcctcctcctctccccctgct
gaggggcctctccacggggctctctacaggaagacagaccagctcctggggaccctgctc
aagatgagcgccgccgttaaggtggtcgacatcaccgggaagactccagtgagtgcgagt
gctcagctcctggaccagacagctcgactgcagtctctgagcaacgctctggacaaactg
aagggtgaagtgtcagagcatgtggtttctcagcatcctggggcgaagatctcctctgac
tttgccaccttccccatttcctccttcgtcaaggcgaaggaggagaagcaggggggtacg
gtgttcgtagggcgcgtggccatcccatgtgccaagggccaggagcaggtgcaccgtctc
gtcctatcacagcagcacctgcagcaagtgcaccgcctcctcatgacctaa

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