Coregonus clupeaformis (lake whitefish): 121571307
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Entry
121571307 CDS
T08357
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04814
Motor proteins
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121571307
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121571307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121571307
03036 Chromosome and associated proteins [BR:
cclu03036
]
121571307
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121571307
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121571307
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
121571307
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
121571307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
121571307
NCBI-ProteinID:
XP_041738638
LinkDB
All DBs
Position
8:complement(54403023..54433964)
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AA seq
1256 aa
AA seq
DB search
MSADGGGKPAKVGSVVEVIGKGQRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGKR
YFHCDENCGIFVRQSQIQLVEDGSSGTSPDTPEAATAKFLPKQKDIPETPKSVKQMPIPK
KSVTCRSTKTPRVLATPASGLSSSLSREDVSEGSLSSKGALGAPVVPLPSGTPATPGAPP
PATPSKAEPPVSKQEEESLRGQVKDLEEKLETLMMKRAEDKVKLKELEKYKIQLEQLQEW
KTKMQEQQADLQKQLKEAKKDAREALESKDRYMEEMSDTADAIEMATLDKEMAEERSESL
QVEVESLKEKLEELTMDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRLKEALVRMRDLS
SSEKQEHVKLQKQMEKKNGELETLRTQKEKLQEEMKQAEATIDELKEQVDAALGAEEMVE
TLTERNLDLEEKVRELRETVTDLEAINEMNDELQENSRETEMELREQLDLNGARVREAQK
RVEAAQETVADYQQTINKYRELTTSLQDTNRELTSAQNANTEQVQQPPAELFDFKIKFAE
TKAYAKAIEMELRKMEVGQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAEL
ISKQAQEKFDLNGNPVERTGIKMRGPPGEQLSFASGLVYSLTLLQATLHKYEQALNCCSV
EVYKRMGTLYSEMSVHERSLDFFIDLLHKDQLDETVHVEPLTKAIKYYQQLYSIHLAEQT
EDCTVQLADHIKFIQSALDCMGAEVVRLRAFLQPGQEGADLNILLKDLDTSCSDIKQFCK
KIRRRMPGTDVPGVPAALAFGAPVSETLTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQE
GLNTLKLEDVAFKAVEQVYGSHGLNPHECLRQSCSSVISTMNKMATAMQEGEYDAERPQG
KTPPVEARAAALRAEITDSEGLGVKLEDRDTVIKELKKSLKIKGEELSEAHVRLSLLEKK
LDTSTKDADERVEKIQTRLDETLALLKKKEKEFEETMDALQADIDQLEAEKAALNQRLSN
QSKVTIEGLRASPASGIASIVTGTTGAGVAPGAGGLSGPMQVVDSPLLRQQVETQRLGIK
HLKNENNRLKAEKMRAQLASLPPLHVPKLPLREASSSPPAEGPLHGALYRKTDQLLGTLL
KMSAAVKVVDITGKTPVSASAQLLDQTARLQSLSNALDKLKGEVSEHVVSQHPGAKISSD
FATFPISSFVKAKEEKQGGTVFVGRVAIPCAKGQEQVHRLVLSQQHLQQVHRLLMT
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagacgggggcggcaagcctgccaaggtgggctcagtggtggaggtgatcggt
aagggccagcgtggcaccgtggcttacgtgggcgccacgctcttcgccacgggcaagtgg
gtgggcgtgatccttgacgagcccaagggcaagaacgacggcacggtccaggggaagaga
tactttcactgcgatgagaactgtggtatctttgtgcgccagtcccagatccagctagta
gaagatggatccagtggcacctctccagacaccccagaagctgcaactgccaagttcctg
cccaagcagaaagacattcctgagactccgaaatcagtcaaacagatgcccattcccaaa
aagtccgtaacctgccgtagtaccaagaccccccgagtcttagccacccccgcctctggt
ctgtccagctctctgtccagggaggatgtcagtgagggcagcctgtcttccaagggtgca
ctgggggctcccgtggtccccctgcccagcggcactcccgccacgcccggagctcctccc
cctgccacccctagcaaggcagagcctcccgtatcgaagcaggaggaggagtctctgcga
ggtcaggtgaaggatctagaggagaagctggagaccctgatgatgaagcgggcggaggac
aaggtcaagctgaaggagctggagaaatacaagatccagctggagcagctgcaggagtgg
aagaccaagatgcaggagcagcaggccgacctccagaaacaactcaaagaggccaagaag
gatgctcgggaggccctggagtctaaagaccgctacatggaggagatgtcagacacggcg
gacgccatcgagatggccacactggacaaggagatggcagaggagcggtcggagagcctg
caggtggaggtggagtcactgaaggagaagttggaggagctcaccatggacctggagatc
atcaaacacgaggtcgaggagaaaggttctgatggagctgcctccagttatcatgtcaag
cagctggaggagcagaacagcagactgaaagaggctctggtcaggatgcgtgacctgtct
tcctctgagaagcaggagcatgtgaagctccagaagcagatggagaagaagaatggagag
ctggagacgctgaggacccagaaggagaaactacaggaggagatgaagcaggctgaggcc
accattgatgagctgaaggagcaggtggatgctgctctcggggcagaggagatggtggag
actctgactgagaggaatctggacctggaggagaaagtcagagagctcagagagactgtc
acagacctggaagcgatcaacgagatgaatgacgagctgcaggagaacagcagggaaacg
gagatggagctgagagagcagctggacctgaatggggccagggtgagagaggcccagaag
agggtggaggccgctcaggagactgtggctgactatcagcagaccatcaacaagtaccgc
gagctcaccaccagcctacaggataccaacagggagctgaccagcgctcagaatgccaac
acagagcaggtccaacagcctcctgctgagctgtttgacttcaagatcaagttcgctgag
accaaggcctacgccaaggccatcgagatggagctgaggaagatggaggtgggccaggcc
aacagacaggtgtctctcctcacctccttcatgcccgactctttcctgcgtcacggaggc
gaccacgactgtattctggtgctcttgctaataccaagactcatctgcaaggctgagttg
atcagtaagcaggcccaagagaagtttgatttgaatggtaacccagtggagaggactgga
attaagatgagaggaccacctggagaacaactcagcttcgcctctggactggtctactct
ctaaccctgctgcaggccacgctgcacaaatacgaacaagctcttaactgttgcagtgtg
gaggtgtataagcggatggggactctctactcagagatgagtgtccatgagcgttcccta
gacttctttatagatctgctgcacaaagaccagctggacgagactgtacacgtggagcct
ctcaccaaggccatcaagtactaccagcaactgtacagcatccacctggctgagcagact
gaggattgcaccgtgcagctggctgaccacatcaagttcatccagagtgctttggactgt
atgggtgctgaggtggtgcgtctcagggcgttcctgcagccggggcaggagggggctgac
ctgaacatcctgctgaaggacctagacacgtcctgcagcgacatcaaacagttctgcaag
aagatcagacgcaggatgccagggaccgacgtgccaggggtgcccgccgctctggccttt
ggcgcaccggtgtcagagactctaacggactgcaggcgtcagctgacgcgggtggttgcc
gtgctacaggaggtggcggctgcgggggcgcagatggttgcccctctaggggaacaggag
gggctcaacaccctcaaactggaggacgtggccttcaaggctgttgaacaggtgtatggg
tcccatggcctgaacccccatgagtgtctgcgtcagtcctgcagctctgtcatctccacc
atgaacaagatggctaccgccatgcaggagggagagtatgacgctgagagaccacaggga
aaaactcccccggtagaggctcgtgcggcggccctcagggcagagatcactgattcagag
ggtctgggagtcaaactggaggacagagacaccgtcatcaaggagctcaagaagtcccta
aagatcaagggagaggagttgagtgaggcccacgtccgtctcagcctgctagagaagaag
ctggatacgtccactaaagacgcagacgaacgcgtggagaagatccagaccagactggat
gagaccctggccctgctcaagaagaaggagaaggagtttgaggagaccatggacgccctg
caggcagacatcgaccagctggaggcagagaaggcggcgctgaatcagcgtctctccaac
caatcaaaggtgaccatcgagggcctcagggcctcgcctgcctctgggatcgcatccatc
gtcacgggaaccaccggagcgggtgttgccccaggagcagggggtctgtctgggccgatg
caggtggtggactcccctctcctccgtcagcaggtggagacacagagactgggcatcaaa
cacctgaagaacgagaacaacagactcaaggcagagaagatgagagcccagctagcctcc
ctccctcccctccatgtccccaagcttcctctgagagaggcctcctcctctccccctgct
gaggggcctctccacggggctctctacaggaagacagaccagctcctggggaccctgctc
aagatgagcgccgccgttaaggtggtcgacatcaccgggaagactccagtgagtgcgagt
gctcagctcctggaccagacagctcgactgcagtctctgagcaacgctctggacaaactg
aagggtgaagtgtcagagcatgtggtttctcagcatcctggggcgaagatctcctctgac
tttgccaccttccccatttcctccttcgtcaaggcgaaggaggagaagcaggggggtacg
gtgttcgtagggcgcgtggccatcccatgtgccaagggccaggagcaggtgcaccgtctc
gtcctatcacagcagcacctgcagcaagtgcaccgcctcctcatgacctaa
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