Coregonus clupeaformis (lake whitefish): 121571340
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Entry
121571340 CDS
T08357
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121571340 (arhgef40)
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121571340 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
DHC_N2
PH
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
121571340
NCBI-ProteinID:
XP_041738680
LinkDB
All DBs
Position
8
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AA seq
1790 aa
AA seq
DB search
MGSEAVEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDYFIPAKHLLH
KLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSTDFYLQVVPFSTRCPRLA
LKCLAPGGRNVQEVLVPESQHPLVFTTEWLHSVNKERGYKREGGGGLDTCLVSTCDGVVR
LPWEEVVYPKFIHNPSDDLTTMADHPTSVPDHTTNLTPVVGLGLGGWGGSSSGEPDSCSW
DEEDDDLPLDSVDAEAALPRRRCSEDGLGRTTRHHQMGGDGDYVELLEPRGGPDGGADPR
QRYLEMHGICKTKTLPLCRRSKAIKLRRGKAWGYGRLDAAGGSRGVLAGKRDPVTPRGDW
LPPRPLPRVIDLGRARRSGSYPPSLQNSDEGEQQGLGKDPEGLGSRGLYFEGPSKERRPG
VGRERDGSGCNVTQPCRDSHGSYSLVATETVNHKAAHVVEGQSDQGSHSESVFEDADKPL
SGDSDTMPTSDTRGSGENAARPLVDIPGNGENVDSPLAVGSETQKGRRSTSDSCLPDETA
DSIEHRETGRSLSRPGTDADPKGATTSEEREEVKTEETGVCPRGKEVKTEETGVCPRGKE
VKTGGFRAPRRKRKGRGGKGKAKCGGRGNQKTRDQASSKPPSKTPQRDPALSPTTNLPIT
AANRSEAAQKPEGPDKELTPVNEGQEKAEIEESNRENQVVQSEVSPDTTSQSGTSLSNHS
TEEVGPETSPDLSNGLSPKAPPLLRELDTELLQSGKLMLTGTVDRLGRAVVITETHLPED
GCRADEMGRVLACYHRITRPSAKERGLTVIVDSRQSPPSALCLAALKQLQAVVPGGLGSV
LILVEEQQQESSPHTLEGVEVHTVRGTGVLQQYIDRQQLPLEMDGDYKHCHSDWLAFRLS
VESLTECCESALSLLEDALQSMDTAPLPDCIKNVPLSMDKHRQLMTSVLVDQRLTELQRR
GGAWLAGLANGTSGLAKRSPDCRAALAATSNLYDSVDDALHRLVRMSNQRGSDLEALGRL
DAMVDKLEKCEREIEQIQDQLEDYREPPISLSRLSLKQQKFKTFRESANELHTVTLAVLG
DLESWSELDWGGLREVQVRVPPVRERLRDMSHCLSDCWTTLDNTQRLLSTLTEANQWCDV
ISSTSPSPSTPLSSLPPIPPSRFQDARALALELGGGALLDLWSQTLERYQRTVAQVKPRL
LQQAERGQNQGQARPKTPSTSSLWDLMGPEGEGDWGVGAGGGEGGLQSWGSLASLFRPQT
CSTLKIGEEKGNKKGGTGGGGGGGGGGGAGGGAGGGAGGGKFLQNLLHPAKKSPTEASLP
PKPPRKRHPSFDLQALLAPRRGPATPRPVEPPVGAASRGGGGGVQGGSGVLIRGVEVSSK
EVVDYTGTPRQHVLLSRAERETGGERQGTTTAQSKLYLLWCRMLSSERQYVAVLKGVEET
CLPLLEAPDTPSSLRGKADLLFPKWASLSSFHSQYLLPAMEGALLQSLLQQDLFSKYREE
FLQYSHYIRTKPEVDSLLVTQAADFFKLRLPSSPPLSPLSFPHCLQAPTQRLEQYCDALE
ELGGLNPASDSSLSVLRHVQRHGEDLRASDLIVGCPVPVAERGELVRQGELLVCGGTRRK
KTGVRSVFLYQHLIIFTKQKSPSPGRTAYSFKHSIKTGEMGLTQSVGEEGVRFEVWVRQA
PRIRDCLTLQCQSGEERAAWTHDIAQLLWTHAIHNTELCLKETMCIGVSSKILLDVTGAP
VTSELDSIYNLNDRVHSSCSDSSSVGSQKEGGSPASGRGHTQNQSPSTAV
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgggctcagaggcagtggaagattgtgtgcagggggctctctcgtccctctaccccccc
tttgagagcacagccccgcctctcctctctcaggttttctctgtgttggagtcgacttat
cagcatgacagtctgaggtacctactggactacttcatcccagcaaagcaccttctgcac
aaactacagcagcatgcctgttctcagtatctgggctgtctgttcctccactccggttgg
cccctctgcctcggagagaaggttgtggtccagctctctactctggactggaggctgctg
cgcagtaccgacttctacttgcaggtggttcccttctccacacgttgcccccgcctggcc
ctcaagtgtttggcccccgggggccgcaacgtccaggaggtcctggtgcccgagtcacag
caccccctggtgttcactacagagtggctgcacagtgtcaacaaggagaggggctacaag
agagaaggaggtggagggttagacacatgtctggttagtacttgtgacggggtggtccgc
cttccgtgggaggaggtggtctaccccaagttcatccacaacccatcggacgacctgact
accatggctgaccacccaacctccgtccccgaccacaccaccaacctcaccccggtggtg
ggcctcggcctgggtggctgggggggctcctcctctggagaaccagactcctgttcctgg
gacgaagaagacgatgacctacctttagatagtgtagatgcagaggccgctctaccccgc
cgacggtgcagcgaggacgggttggggaggacgacgaggcaccaccaaatgggtggtgat
ggggactacgtggaactcctggagcccagggggggtccggacggcggcgcggatcccagg
cagaggtacctggagatgcatgggatctgtaagaccaagacactgccgctgtgtaggagg
agcaaggctatcaagctccgcagagggaaggcctgggggtacgggcgactggacgcagcc
gggggcagtaggggcgttctggcgggtaagagggaccccgtgaccccccggggggactgg
ttacccccccgccccctgcctagagtcatcgatctaggccgagcgaggcggtctgggtcg
tatcccccctcgcttcagaactccgatgaaggggagcaacagggcctaggaaaagaccca
gaaggcctaggaagccgggggctgtattttgagggtccgtccaaggagaggaggcccggg
gtgggcagggagagggacggcagtgggtgtaatgttacacagccatgcagggacagccat
ggtagctacagtttggtagcgaccgagacagtcaatcacaaagcagcgcacgttgtagag
ggccaatcggatcaaggctctcactctgaatctgtgtttgaggatgctgataagccactg
agtggagacagcgacaccatgcccacttcagacacacgaggaagtggggagaatgctgcg
aggccattggttgatattccaggaaatggggagaacgtggacagcccattggcagttgga
tctgaaacccagaaaggaagacgttccactagtgactcttgtttaccagacgaaacagca
gactcgatagaacacagagagacgggacgttctctctctcgacccggtactgacgctgac
ccaaagggagcaacaacttcagaagagagggaggaagtaaagacggaggagacaggagtg
tgtcctagaggaaaggaagtaaagacagaggagacaggagtgtgtcctagaggaaaggaa
gtaaagacaggaggattcagggcacccaggaggaagaggaaagggagaggtggaaagggg
aaggctaaatgtggtggtcgtggcaaccagaagactcgagaccaagccagttccaaacca
ccaagtaaaacacctcagcgtgatcccgcactctccccgacaaccaacctgccaatcact
gcagccaaccgatctgaggcagcacagaagcctgaggggccggataaagagctcacacca
gtcaatgagggacaagaaaaagctgagattgaggaaagcaatagagaaaaccaggttgtc
caatcagaagtctcacctgacacaactagccaatcaggcacatccttatctaaccactct
acagaggaggtggggccagagacatctcctgacctatcgaatggcctatcacctaaagcc
cctcctctcctaagggaattggacacagaactcctccaatcaggaaagctgatgttgaca
ggtacggtggacaggctgggacgggctgtggttatcactgaaacgcatctcccagaggac
ggttgccgtgcggacgagatgggccgtgtcttggcctgttatcacaggatcacccgccct
tctgctaaagagcgtggtctaacagtaatagtagacagtagacaatctcctccctccgct
ctctgcctcgccgcactgaaacaattacaggctgtggtcccgggaggtcttggctctgtc
ctcattctggtggaggagcagcagcaggagtcgtctccacacactctagagggagtagag
gtgcacacggtgcgagggacaggggtccttcagcagtatatagacaggcagcagctgcct
ctggagatggacggagactacaaacactgccactctgactggctggccttcagactgagt
gtggagagtctaactgagtgttgtgagagcgccctctctctgttggaggatgcactgcag
tctatggacacagcaccactaccagactgtatcaagaatgttcctctaagtatggacaaa
cacagacagctgatgacgagcgtcctagtcgaccaacggctgactgagctgcagcggagg
ggcggggcctggctggcagggctggccaatggcacatcaggactagcaaagcggtcccca
gactgcagggctgctctggctgcgacctctaacctctatgacagcgtggatgatgccctc
caccgcctcgtccgcatgtccaatcagaggggaagtgacctggaagccctcggccgattg
gatgccatggtggacaaactggaaaagtgtgagagggagatagagcagatccaggatcag
ttggaagactacagggagcctcccatctctctcagcagactctccctcaaacagcagaag
ttcaagactttcagagagtcggccaatgagctgcacactgtgaccctggcggtccttgga
gatctggagagctggtctgagctggactgggggggactgagagaggtgcaggtcagggta
ccaccggtcagagagagactcagagacatgtctcactgtctgtctgactgctggacaaca
ctggacaacacacagagactactgtccacactgaccgaggccaaccagtggtgcgacgtc
atctcctccacctcaccctccccctccacccccctctcctccctccctcccattccgcca
tcccgtttccaggacgcccgtgccttagccttggagctgggtggtggagctctcctggac
ctgtggtctcagaccctggagcgataccaacgcaccgtggcccaggtcaaacccaggctg
ctgcagcaggcagagcggggtcagaaccagggccaggcccggcccaagaccccctccacc
tccagtctgtgggacctgatggggcccgagggagagggagactggggtgtgggggccggg
ggaggggaaggaggcctccagtcctgggggtccctggcttcactgtttcgcccacagacc
tgctccactctgaagataggagaggagaaagggaataagaaggggggaacaggaggagga
ggtggaggaggaggtggaggaggagcgggaggaggagcgggaggaggagcgggaggaggg
aagtttctgcagaatctgctgcatccggcgaagaagagtcccacagaagcctctttgccc
cccaagccccccaggaagcgtcaccccagcttcgacctccaggccctgctggccccccgt
cggggccctgccacccccaggcccgtagagcctcctgtgggtgcagccagccgaggagga
ggaggaggggtgcaggggggatcaggggtgctcatcagaggggtagaggtgagcagcaag
gaggtggtggactacaccgggacgccaagacaacacgtgctgctgagccgagcggagagg
gagacgggaggggagaggcagggcaccaccaccgcacagagtaaactgtacctattgtgg
tgcaggatgttgagttcagagaggcagtacgtggccgtattaaagggggtggaggagacc
tgcctgcccctcctggaggctccagacaccccctcctccctcagggggaaagcagacctc
ctgttccccaaatgggccagcctcagctccttccattcgcagtacctcctcccagccatg
gagggagctctactgcagagtctgctgcaacaggacctcttcagtaaatacagagaggag
tttctccagtactctcactacatcaggactaaaccagaagtggactccctgttggtcact
caagctgcagacttcttcaagctcagactcccttccagccctcctctctcccccctgtcg
ttcccccactgtctccaggcccctacacagagactggaacagtactgcgatgccttggaa
gagctgggagggctaaaccctgcctccgactcctccctctccgtcctcagacacgtccag
cgtcatggcgaggacctccgggccagcgacctcatcgtcgggtgtccggtcccagtggcg
gagcgtggagagctggtgcgtcaaggggagctgttggtgtgtggggggaccagaaggaag
aagacaggggtgaggagtgtgttcctctatcaacacctcatcatcttcaccaaacagaag
agccccagtccaggacgcaccgcctacagcttcaaacacagcatcaagacgggtgagatg
ggtctgacccagagtgtgggtgaggagggggtgaggttcgaggtgtgggtgcgtcaggcc
cctcgtatcagggactgcctgaccctgcaatgtcagagtggagaggagagggcagcctgg
acacacgacatcgctcagctcctctggactcacgctatacacaacacagagttgtgtctg
aaggagacaatgtgtattggtgtgtccagtaagatactactagatgtcacaggagcaccg
gtaacatctgaactcgactctatctacaatctcaacgacagagtccacagtagctgttca
gactcttcctctgttggcagtcagaaggaggggggatccccagcctctgggaggggacac
acacagaatcagtctccttccactgcggtgtaa
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integrated database retrieval system
