Coregonus clupeaformis (lake whitefish): 121571347
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Entry
121571347 CDS
T08357
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein C isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121571347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121571347
Spliceosome [BR:
cclu03041
]
Common components
Common spliceosomal components
hnRNP proteins
121571347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
121571347
NCBI-ProteinID:
XP_041738690
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All DBs
Position
8:53260247..53292295
Genome browser
AA seq
308 aa
AA seq
DB search
MDQSLTSSSMMSGNVTNKTDPRSLHSRVFIGNLNTLLVTKADVEAIFSKYGKIVGCSVHK
GFAFVQYANERNARAAVGGEDGRMIVGQVLDINLACEPKPQRSKTVKRSAGDIYSSSFDL
DYDFQRDYYDRMYSYHSRVPPPPPPLSRPVIPSKQPRVSLSGGGGGGGSRRTKTSFSSST
SRSSQSRTSTSRTMKADDLQTIKRELTQIKHKVDYLLESLERMEKDHSKKSDMKSSGKPE
PGEVSPLLNCGGKEESLKRERENQSLNDSEEEGDLLEEQEVKNRGREDNDEEEEEGEEDG
DDANGEGA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtctctcacctccagtagtatgatgtccggcaacgtgaccaacaagacggac
cctcgctcgctccattcccgggttttcatcgggaacctcaacacactcctggtcaccaag
gcagatgtagaggccatcttcagcaagtacggcaagatcgtgggctgctccgtccacaag
gggttcgcgttcgtccagtacgccaacgagaggaacgcccgggccgctgtaggcggcgag
gacgggaggatgattgtaggacaggtgctagacattaacctcgcttgtgaaccgaagcct
cagagatcgaagacggttaagcgctccgcaggagacatatacagttcttcatttgatttg
gactatgacttccagagagattactatgacaggatgtactcgtaccattcccgtgtgccc
cctccgcctcctcccctgtcccggccagtgatcccctccaaacagccccgggtcagtttg
agtggaggtggaggtggagggggcagccgacgcaccaagactagcttctcatcttccacc
tccaggagcagccagagcaggacctcgacctcacgcaccatgaaagcagacgacctgcag
accatcaagagagagctgacccagatcaaacacaaggtggactacctgctggagagtctg
gaacgcatggagaaggaccacagcaagaagtcagacatgaagagtagtgggaagccggag
cccggggaggtgtctcctctcctcaactgcggaggaaaggaggaaagcctgaagagggag
agagagaaccagtctctcaacgactcagaagaggagggagacctactggaggaacaggag
gtaaagaatcgaggaagggaggacaatgatgaggaagaggaagaaggagaggaagatgga
gatgacgccaacggagaaggcgcttaa
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