KEGG   Coregonus clupeaformis (lake whitefish): 121571355
Entry
121571355         CDS       T08357                                 
Name
(RefSeq) splicing factor 3B subunit 2 isoform X1
  KO
K12829  splicing factor 3B subunit 2
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121571355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121571355
Spliceosome [BR:cclu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    121571355
 Complex B
    121571355
 Complex C
   U2 SnRNP specific factors
    121571355
SSDB
Motif
Pfam: DUF382 PSP SAP
Other DBs
NCBI-GeneID: 121571355
NCBI-ProteinID: XP_045078005
LinkDB
Position
8:complement(52899802..52929130)
AA seq 904 aa
MASDGPPGTEPMPSDLGSSVAALNTWSNPELQAKLGELGAPNMGPREEMLDRLKGYMMQT
GMMLSKPNQGGDDKPMTTQVSTNRPYKMPGIPPMPPMPMPPMPPGMGMLQAMSMMAGGPP
PPGMHMGMEPPGMPPGLSQEDQLKMVQQRAAMMMQHEERAKQQGDSRAMEERMKEQELLE
QQKRAAVMLEHERQQELSKMQHGGPGPRMSDPGSRPPGMMPPMMRGMNPGGMNPPPPGIS
TGGMNPPPPGMSMMHTQRQRVPPPPGEDAREVWQGEEVGIGPKIPQALEKILQLKEIRQE
QLSTAPTEEEEEIQEMEMNNSSAPVLSETEEDDGSLSKKDKNRKRRNRKKKNKKRREQEK
REQVVEKKEEDGEKEKEHEVEIEYVTEEPEIYDPNFIFFKRIFEAFKLTDDVKKEKEKEP
EKEKETPSMMKKKGFEEEKKDSDDSDDEIRPDVSKLSKKKLRRMNRLTVAELKQLVARPD
VVEMHDVTAQEPKLLVHLKATRNTVPVPRHWCFKRKYLQGKRGIEKPPFELPEFIKRTGI
QEMREALQEKEDAKTMKTKMREKVRPKMGKIDIDYQKLHDAFFKWQMKPKLSIHGDLYYE
GKEFETRLKEKKPGDLSDELRIALGMPVGPNSHKVPPPWLIAMQRYGPPPSYPNLKIPGL
NSPIPESCSFGYHAGGWGKPPVDETGKPLYGDVFGTNAGDFQAKAEEEEVDRTPWGELEP
SDEESSEEEEEEESDEEKPDETGFFTPADSGLITPGGFSSVPAGMETPELIELRKKKIEE
AMDGNETPQLFTVLPERRTGSVGAAMMASTHIYDVSGAMAGRKAGGGQESQGVEVALAPE
ELELDPMAMTQKYEEHVRNQEAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDTRSGAKKYK
EFKF
NT seq 2715 nt   +upstreamnt  +downstreamnt
atggcatccgacggaccgccggggactgaacctatgccttccgacttggggagctctgta
gcggccctgaatacatggagcaaccctgagcttcaagccaagctaggcgagctaggcgct
cccaacatgggtcccagagaggagatgctggacaggctcaagggatacatgatgcagact
ggaatgatgctcagcaagcccaaccaaggaggtgatgacaaacctatgaccacgcaggtc
agcaccaacagaccctataagatgccaggcatcccccccatgcccccaatgcccatgccg
cccatgccacctggtatgggtatgctccaggcgatgagcatgatggcgggtggaccccct
ccaccagggatgcatatgggcatggagcctccaggcatgccccccggcctctcccaggag
gaccagctgaagatggtgcagcagagggctgccatgatgatgcagcacgaggagagggcc
aaacagcagggggattcccgtgctatggaagagcgcatgaaggagcaggagcttctggag
cagcagaagagggcggcggtgatgttggagcatgagaggcagcaagagctctctaagatg
cagcatggaggaccagggcccaggatgtctgacccggggtcacgaccccctggcatgatg
ccgcccatgatgagaggtatgaaccctggtggaatgaacccaccccctcctggtataagt
actggtggaatgaacccaccccctcctggtatgtccatgatgcatacccagagacagaga
gttcccccgccaccaggagaggacgccagagaggtgtggcagggagaggaggtgggcatt
ggtcctaagatccctcaggccctggagaagatcctccaactgaaggagatcagacaggag
cagctcagcactgctcccacagaagaggaggaggagatccaggagatggagatgaacaac
tcctccgcccccgtcctgtctgagactgaagaggatgacggctctctctccaagaaagat
aaaaaccgcaagcgcaggaaccgcaagaagaagaacaagaagaggcgtgagcaggagaag
agggaacaggtggtggagaagaaggaggaggatggagagaaggagaaagagcatgaggtg
gagatcgagtacgtcactgaggaaccggagatctatgatcctaacttcatcttcttcaag
aggatctttgaggccttcaagctgactgacgatgtgaagaaagagaaagagaaggagccg
gagaaagagaaggagactccttccatgatgaagaagaagggatttgaggaggagaagaag
gacagcgatgacagtgatgatgagatcagaccagatgtttccaagctgtctaagaagaag
ctgagaaggatgaatagactgactgtggctgaactcaaacagttggtggcgcgtcctgat
gtggtggagatgcatgacgtgactgcccaggagcccaagctgctggtgcacctgaaggca
accaggaacacggtgcccgtcccccgacactggtgcttcaagaggaagtacctccagggc
aagaggggtatagagaagcccccctttgagctgccagagttcatcaagaggacgggcatc
caggagatgagagaggctctgcaggagaaggaggatgccaagaccatgaagaccaaaatg
agggagaaggttcgtcccaagatgggcaagatcgacatcgactaccagaagctccacgac
gccttcttcaagtggcagatgaagcctaaactctccatccatggagacctctactacgag
ggtaaagagtttgagaccaggctgaaggagaagaaaccaggtgatctgtcagatgaactg
cgtattgctctgggcatgccggttggaccgaactcccacaaggtgccccctccctggctg
atcgccatgcagagatacggcccccctccctcctatcccaacctcaagatccctggactc
aactcacccatcccagagagctgttcatttggttaccatgctggtggttgggggaagcct
cctgtagatgagacaggcaagcctctgtacggtgacgtgttcgggaccaacgcaggagac
ttccaggctaaggctgaggaggaggaggtggatcgtacgccgtggggagagctggagcct
tcagacgaggagtcttcagaggaagaagaggaagaggaaagcgacgaggagaaaccagac
gaaaccggcttcttcacgccggcagacagtggtctgatcaccccaggaggcttctcgtcg
gtgcctgctggtatggagactccagagctcattgagctgaggaagaagaagatcgaggag
gccatggacgggaatgagactcctcagctgttcacggtgctcccagagaggaggacgggc
tctgtaggagcagccatgatggcgtccacacacatctacgacgtatcaggggcgatggcg
ggtcgtaaggcgggcggaggccaggagtcccagggggtggaggtagccctggccccagag
gagttggagctggacccaatggccatgacccagaagtacgaagagcacgtcaggaaccag
gaggcccaggtggagaaggaggacttcagcgacatggtggctgagcacgccgccaaacag
aagcaaaagaagaggaaggcccagccccaagacacacgaagtggtgccaagaaatacaaa
gagttcaagttttag

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