Coregonus clupeaformis (lake whitefish): 121571373
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Entry
121571373 CDS
T08357
Name
(RefSeq) zinc finger and BTB domain-containing protein 22
KO
K10502
zinc finger and BTB domain-containing protein 22
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121571373
04121 Ubiquitin system [BR:
cclu04121
]
121571373
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121571373
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121571373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
zf-C2H2_4
DUF5810
zf-Di19
zf-C2H2_jaz
BTB_KLHL33
BTB_BTBDG
C2CH-4th_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
121571373
NCBI-ProteinID:
XP_041738714
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All DBs
Position
8:29637465..29648494
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AA seq
693 aa
AA seq
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MDQGCISIVTGAPAGLMVQVCFPSVRAAVLDSLNRQREEGRLCDLSIQVQGQVFRAHRCV
LAASSPYFHDQVLLKNVTTVSLPSVMDPVAFESVLSSAYTGQLSIVRDDIVNYVTVASFL
QMWHIVDKCTEILKRPGPPEECNPGDAAAATHHGASSRQQSPSSTNCLYMEKEGKGKERR
PYGQEQNSLPPLATWRRPQQFPRWGRPRSSPQTVMSMPAQRLADSQRDYHPAGESDYSSC
EEVWMSSHSKASPLGHTRHGGFPGETLILRARLRQRAVPPSAEKLHGRDIGSGRGFGEEP
QEKRGTERGIEEMGEEEKREGPERRGNSGDFHTSVHQVEEGGQPEGKKSSGELQKKEERH
LGRSSALTSPHAGDPDDVIPGPSCPAPTPSTRMQWQAGPWSQQVARPQAGEEDYRREDDE
EDEEEVDFGRFADGAFGRGTYDEIEDGTGQVSQRPLVPDSPDDNDFILGAQELNWPSGVN
MTHGGGTPTSSCHLSPSPVPFPPSSSPPIPSSSSSLSLAGAPYMGKVHFCHCGKAYTLKS
MRDRHVKMQHLNLRPFACPVCTKSFKMKHHLTKHLKTHGGLRPYECGLCGKKVIWRDSFL
RHQARCERLAASCDGAAASSNTRAAADMDDGYAYGFGEGFLSQGGQVKVEQADFQGEAES
GMSGLLGGGAELGSQSRTLVSHNFKEEASDRFS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggatcagggctgcattagcattgtcactggtgcccctgctggcctgatggtccaagta
tgcttccccagtgtgcgtgcagcagttttggacagcctaaatcgacagcgggaggaaggc
cggctctgtgacctctccatccaggtgcagggacaggtgttcagggcccaccgctgtgtg
ctggctgcctcctcgccatactttcacgatcaggtgttgctgaagaatgtgacgacagtg
tctctgccctctgtcatggaccccgtggcctttgagagtgtcctgagctcagcctacacc
ggccaactgagcatagtgcgtgatgacattgtcaactacgtgacggtagccagcttcctc
cagatgtggcatattgttgacaagtgcacagagatcctgaagagacctggacccccagaa
gaatgcaaccctggggatgctgcagcagccacacaccatggtgcctcctcaaggcagcag
tccccaagcagcaccaactgcctatacatggagaaagaggggaaaggtaaggagaggagg
ccctacggccaggagcagaattctctgcctccattggccacgtggaggaggccccagcag
ttccccaggtggggccgccccaggtcctcaccccagacagtcatgtccatgcctgcccag
cgcctagctgactcacagcgggactaccaccctgctggggagagtgactactccagctgt
gaggaggtgtggatgtcgagccacagtaaagccagccccctaggacacaccaggcatggg
gggtttcctggtgagacgttgatactgagagctagactgagacagagggcagtgccacca
agtgctgagaaactgcatggcagggatataggaagtggaaggggctttggggaagagcct
caggagaaaagagggactgaaagagggattgaagaaatgggggaagaggagaagagggag
gggcctgagcggagaggaaactctggagacttccacactagtgtacaccaagttgaagag
ggaggacagccagaggggaaaaagagctcaggggagcttcagaagaaagaggagagacac
ctggggagaagctcagccctgacttctccccatgctggggatccagatgatgtgattcct
ggcccttcctgcccagctcctacaccctcgacccggatgcagtggcaggccggtccctgg
tctcagcaagtagctaggccgcaagctggagaggaagactacagaagagaagacgacgaa
gaagatgaggaggaagtggactttggccgatttgcagatggtgcttttggaaggggcacc
tatgatgagattgaggatggcaccgggcaagtttctcagagacccttagtacctgactct
cctgatgacaatgactttatcctgggggcccaagagttgaactggccctctggggtgaac
atgacccatggtggtggtaccccaacctccagctgccacctgtccccatcccctgttcca
ttccccccttcctcctcaccccccatcccctcttcctcctcctcactctcccttgccggg
gccccttacatgggcaaagtgcacttctgccactgtgggaaggcctacaccctgaagagc
atgcgtgaccgccacgtcaagatgcagcacctcaacctgcggcccttcgcctgccctgtg
tgcaccaagagcttcaagatgaagcaccacctgaccaagcacctgaagacccacggtggg
ctgcggccctatgagtgtggcctgtgtgggaagaaggtaatctggagggacagtttcctg
cgccaccaggcccgctgtgagagactggccgccagctgtgatggagccgctgccagtagt
aacaccagagcggctgccgacatggacgatggttatgcttatgggttcggggaggggttt
ctctcacagggcgggcaggtgaaagtggagcaggcagactttcagggggaggcggagtct
gggatgagtgggttgttagggggtggggctgagttaggctctcagtcaaggactctggtt
agtcacaactttaaggaggaagccagcgacaggtttagctga
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