Coregonus clupeaformis (lake whitefish): 121571378
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Entry
121571378 CDS
T08357
Name
(RefSeq) protein argonaute-3-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121571378
03036 Chromosome and associated proteins [BR:
cclu03036
]
121571378
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121571378
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121571378
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121571378
microRNA pathway
RISC loading complex
121571378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
121571378
NCBI-ProteinID:
XP_045077843
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Position
8:29356942..29386305
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AA seq
878 aa
AA seq
DB search
MEIGTSGDVGAQALFSVPRRPGFGTMGKPIKLLANCFQVDIPKMDVYLYEVDIKPEKCPR
RVNREVVDSMVKHFKVTIFGDRRPVYDGKRSLYTANPLPVATAGVDLDVTLPGEGGKDRP
FKVSIKFVSLVSWHMLHEVLMGRTMPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGR
SFFSSPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLE
NGQTVERTVAQYFREKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVRSANYEADPFVQEFQFRVRDEMAQVTGRVLPAPGLQ
YGGRASLEHFMPQQMNPAVSLQNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQ
CREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGSDSVEPMFRHLKNTYAGLQLIIVI
LPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPH
QRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVIQD
LASMVRELLIQFYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACIMLEKEYQPG
ITYIVVQKRHHTRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSR
PSHYHVLWDDNCFTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKE
HDSAEGSHVSGQSNGRDPTALAKAVQIHHDTLRTMYFA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaacttcaggagatgttggggcccaggccctattctcagtgcctcggcgg
cctggctttggcaccatggggaagcctatcaagctactggccaactgcttccaggtggat
atccccaagatggacgtctacctctatgaagtagacatcaagcctgagaagtgcccgcgt
cgcgtcaatagagaggtggtggactccatggtgaagcacttcaaggtgaccatctttggg
gaccgaaggccagtctacgatgggaagaggagcctctacacagccaaccccctaccagtc
gccacagcgggggtggatctggacgtcaccctgccaggggaggggggtaaggatcgcccc
ttcaaagtgtctatcaagtttgtgtcgctagtcagctggcacatgctgcacgaggtcctg
atggggcgcaccatgcctgagcccttggagctggacaagcccatcagcaccaaccctgta
cacgctgtggacgtggtgctgcgacacctgccttccatgaagtacaccccagtggggcgc
tccttcttctcctccccagagggttacgaccaccccctgggcgggggcagggaggtgtgg
ttcggcttccaccagtcggtgcggcccgccatgtggaagatgatgctcaacattgacgta
tcggctacggcgttctacaaggcccagccggtgatccagttcatgtgtgaggtcctggac
atccacaacatagacgagcagccccggcccctcactgactcccacagggtcaagttcacc
aaagagatcaaaggtctgaaggtggaagtgacccactgtgggacgatgcggaggaagtac
agagtgtgtaacgtgacccgccgccctgccagccaccagacgttccccctgcagctggag
aatggtcagacagtggagcgcacggtggcccagtacttcagagagaagtacagcctgcag
ctgaagtacccccacctcccctgcctacaggtgggccaggagcagaaacacacctacctg
ccactggaggtgtgcaacatagtagctggccagcgctgtataaaaaaactcactgataac
cagacgtccaccatgatcaaagccacggcccgctctgccccagacagacaggaggagatc
agcaggctggtgcggagtgcgaactatgaggcggacccgttcgtccaggagtttcagttc
cgcgtgcgtgacgagatggctcaggtgactggtcgtgtgctgccggcccccgggctgcag
tacggtggcagggcaagcttggaacacttcatgccccagcagatgaaccctgcggtgtcg
ttgcagaaccgcacggtggccacgcccagccacggtgtgtgggacatgaggggcaaacag
ttccacaccggggtggagatcaagatgtgggccatcgcctgcttcgccacgcagaggcag
tgtcgcgaggagatcctcaagggttttactgaccagctgcgtaagatctctaaggatgct
gggatgccaatccagggccagccatgtttctgtaagtacgctcagggatcagacagcgtg
gagcccatgttcaggcacctgaagaacacctatgctggcctgcagctcatcatcgtcatc
ctgcctgggaagaccccagtctatgctgaggtgaagcgggttggagacaccctcctcggc
atggccactcagtgtgtccaggtgaagaacgtggtgaagacatcccctcagaccctctcc
aacctctgcctcaagatcaacgtcaaactggggggcatcaacaacatcctggtgccacac
caacgtccctcagtgttccagcagcctgttatcttcctgggggccgacgtcactcatcct
ccagccggagatggaaagaagccatccattgcagcggtggtgggcagtatggatgcccac
cccagcaggtactgtgccacagtgagggtccagagacccagacaggaggtgatccaggac
ctggcctccatggtgcgggagctcctcatccagttctacaagtccacccgctacaaaccc
accagaatcatattttacagggatggagtgtcagagggacagttcagacaggtgctgtac
tatgagctgctggccattagagaggcctgtatcatgttggagaaggagtaccagccgggc
atcacctacatcgtggtgcagaagcgccaccacacgcgcctcttctgtgccgaccgcaac
gagcgggttggacggagtggtaacattcctgcaggcaccactgtggacacagacatcacc
cacccctatgagtttgacttttacctctgcagccatgcaggaatacagggtacgagccga
ccttcccactaccacgtcctgtgggacgacaactgcttcacggctgacgagttccagctg
ctcacctaccagctgtgccacacctacgtgcgctgcacccgctcagtctccatccccgcc
ccagcctactacgcccacctggtggccttccgtgcccgctaccacctggtggacaaagaa
catgacagtgcggagggaagccatgtctcagggcagagtaatggccgagaccccacggcc
ctcgccaaggctgtccagattcatcacgacacactgaggaccatgtacttcgcctga
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