Coregonus clupeaformis (lake whitefish): 121571410
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Entry
121571410 CDS
T08357
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121571410
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121571410
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF898
Motif
Other DBs
NCBI-GeneID:
121571410
NCBI-ProteinID:
XP_041738774
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Position
8:complement(27544411..27557661)
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AA seq
676 aa
AA seq
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MEPSPSMNLTMQNEEEDQRPLLPSKVVPLPPAFGNQCGRNHSCQRGGDHSVLLDGTQSSP
ALSYYNGCQYVSPSSHSSPRRGDNKEKVRGKEVHKEKRGKKTAENKQNAGHKDWIWGSKT
KRSSPQRRQQDIKSTQSPYNRVCMSHMDLRDTESGPPSKGGRRLEATSMEMQVRQSLPEI
IITTKDDYQPQAPNQTSSSDKNHTKSEAKGTYGGGEESSGAEHKDGPHDCPHKKTQSIGR
RLVRRRALFERRQRLNDCALAVGMFGVVVMVTETELSWSIYSKSSIYSMAMKSVISLSSL
TLLGLIIVYHICEVQLYIHDNGAEDWRIAMTMERVTLIALELFVAAVHPFPVGLPLSWKA
MSPTLSESELEIVLALPMFLRLYLLGRALMLHSRLYTDTASRSIGALNKIHFNSRFVVKT
LMTIYPGTVLMIFSVSLWLVAAWGLHVCERHHNYKDLSSNYMEALWMVSVTFLSIGYGDV
VPHTYCGRSICLLTGIMGAGCTVLVVAVVARKLELTRAEKHVHNFMMDSHFTKGIKIAAA
NVLRETWMIYKHTKLTRERDHCRVRMHQRKLLLAIHRLRDVKMERRKLADQANSLVDLCK
MQNLMYDVLSEVSGCRGDLETHINSLQQNVEELREGFRTLMPLLSSTLATQNSSIRHLLR
EREEQAVTRSMGGQDR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggagccctctccctctatgaacttgacaatgcagaatgaggaggaggatcaacgtccc
ctccttccatcaaaagtggtccctctcccacctgcttttggcaaccagtgcggaaggaac
cactcatgtcaaagagggggagatcactcagtgttgctcgatggaacccagtcatcaccc
gccctctcatattacaacggctgccaatatgtctcaccctcatcccactcatcaccccga
aggggagacaataaggaaaaggttagggggaaggaggtgcacaaggaaaagagaggcaag
aagacagcagagaataaacagaatgctgggcacaaggattggatttggggtagtaaaaca
aaaaggtcaagcccacagaggcgccagcaggacattaaatccactcagtcaccctacaac
agagtctgtatgtctcatatggatttaagggatacagaaagtgggccacccagtaaagga
ggtcgaaggctagaggccacatcaatggagatgcaggtccgccagagtctacccgagatt
atcattacaaccaaagacgactaccagccacaggcccccaatcaaacatccagctcggac
aagaatcacaccaagtctgaggccaagggcacctatggtggaggtgaggagagcagtggt
gcagagcacaaggatggtccccatgactgccctcacaagaagacccagagcatcggtcgt
aggctggtccgccgaagggcgctgtttgagaggaggcagaggctgaatgactgtgcgctc
gctgtgggcatgtttggagtggtggtcatggtcaccgagacagagctctcctggagcatc
tacagtaagagctccatatactccatggctatgaagtctgttatcagcctatcctctctt
accctgctgggcctgatcattgtctaccacatctgtgaggtgcagctctacatccacgat
aacggagcagaggactggcgaatcgccatgacaatggagcgggtgaccctgatcgccctg
gagctgtttgtagcggcggtgcacccgttcccagtgggtctcccattgtcatggaaagcc
atgtcccccacgctgtcagagtcggagctcgagatcgtgctggctctgcccatgttcctg
cgactctacctcctgggtcgtgccttgatgctgcacagccgactctacacagacaccgcc
tctcgcagcattggcgccctcaacaagatccacttcaacagccgttttgtggtcaaaacc
ctgatgaccatctaccctggcactgtgttgatgatcttcagcgtctctctgtggctagtc
gctgcatggggcctacatgtctgtgagagacaccacaactataaggacctgagcagtaac
tacatggaggccctgtggatggtctcagtcaccttcttgtccattggttacggggatgtt
gttccccacacctactgtggccgcagcatctgtctactcactggcatcatgggggctggt
tgcacagtgctggtggttgccgtggttgccaggaaactggagctgaccagggcagagaaa
cacgtccacaacttcatgatggactcccactttacaaaagggataaaaattgctgcagca
aatgtactaagagagacttggatgatctacaaacacaccaaactgactagggagagagac
cactgcagagtacgcatgcaccagaggaagctgctgcttgcaatccaccggctgcgtgat
gtgaagatggagaggaggaagttggctgaccaggccaactcgctggtggatctctgcaag
atgcagaatctgatgtatgacgtgctgtcagaggtgagtggatgccgaggggacctggaa
acacacataaacagtctgcagcagaatgtggaggagctgagagaaggctttaggaccctg
atgcccctcctctctagcaccctcgccacacaaaactcttccatccgccacctgctcagg
gagagggaggagcaggcagtgacacggagcatgggagggcaggataggtaa
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