Coregonus clupeaformis (lake whitefish): 121571416
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Entry
121571416 CDS
T08357
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121571416 (rnf115b)
04121 Ubiquitin system [BR:
cclu04121
]
121571416 (rnf115b)
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121571416 (rnf115b)
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121571416 (rnf115b)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121571416 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
Zn_ribbon_19
zf-ANAPC11
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
C1_2
DUF7560
HypA
Motif
Other DBs
NCBI-GeneID:
121571416
NCBI-ProteinID:
XP_041738782
LinkDB
All DBs
Position
8:27358865..27367613
Genome browser
AA seq
304 aa
AA seq
DB search
MAEATAAPQHRFFCHCCKGEIDPKLPEFTCPRCESDFIEELTEDSSLLENSSTAEVNDDA
GTLFSEVPLWQLLFMERSALLSDPSASESDQSLLQAATASDAVEEELEGPSVDPVGGTEP
LEPEPERPSRPSSQGRRQSRAPAVEGIVQQFLAGLFANNGNPGVAPAALSGMLHSNPGDY
AWGQGGLDAVITELLGQFESTGPPPAEKEMISTLPSVSVSQEQTDSRLGCPVCREEYSVG
ESVKQLPCLHYFHCDCIVPWLELHDTCPVCRKSLDGVDQTIQPPPEPPEPPSIRTDPQEE
RQAI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcaacggcggcaccacaacaccgttttttctgtcactgctgtaaaggtgaa
atcgaccctaaactcccggaattcacgtgccccaggtgtgagtccgatttcattgaggag
ttgacagaagactccagtctcttggaaaacagcagcactgcagaggtcaatgatgatgca
ggcacactcttttcagaggtacctctgtggcagctgctgtttatggaacgctctgccctt
ctctcggacccctccgcctctgagtctgaccagagccttctacaggctgccacagccagt
gatgcagtggaggaagagctggagggcccttctgtggaccctgtgggaggcacagagcct
ttggagccggaaccggaacgcccctctcgcccgtctagccaggggaggcgacagtcccgt
gcgccagcagtggagggtattgtgcaacagtttttggctggtctgtttgccaacaatgga
aatccaggcgtcgcaccagctgcactgtctggcatgctccattcaaatccaggggactat
gcctggggtcagggaggtctagacgcagttatcacagagttgttaggtcaatttgagagc
acaggtccacctcctgcagagaaggagatgatctcaaccctcccctcagtcagcgtctct
caagaacagacagacagcagactggggtgtccagtatgtagggaggagtactccgtggga
gagtctgtcaaacagctgccctgcctccattatttccactgtgactgtatagtgccatgg
ctcgaactgcatgatacctgtcctgtgtgtcgtaaaagtcttgacggcgtcgaccagact
atccagcccccaccagaacccccagagcccccctccatcaggacagaccctcaggaggag
agacaggctatttga
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