Coregonus clupeaformis (lake whitefish): 121571429
Help
Entry
121571429 CDS
T08357
Name
(RefSeq) adhesion G protein-coupled receptor B1
KO
K04596
adhesion G protein-coupled receptor B1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04115
p53 signaling pathway
cclu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121571429
09143 Cell growth and death
04115 p53 signaling pathway
121571429
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121571429
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121571429
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121571429
Peptidases and inhibitors [BR:
cclu01002
]
Mixed peptidases
Family P2
121571429
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Phagocytosis
Others
121571429
G protein-coupled receptors [BR:
cclu04030
]
Adhesion receptor family
Brain-specific angiogenesis inhibitor (BAI)
121571429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_2
AGRB_N
TSP_1
TSP1_spondin
GAIN
TSP1_ADAMTS
TSP1_CFP_C
TSP1_CCN
HRM
Motif
Other DBs
NCBI-GeneID:
121571429
NCBI-ProteinID:
XP_041738809
LinkDB
All DBs
Position
8:26967943..26989582
Genome browser
AA seq
1537 aa
AA seq
DB search
MAWSPPRSGPLVALVALLFLGLTSSIPSGPASDTCATLEQSRFFGLFSSTANLPSTPCSW
TLQNPDPRRYTVYMKITKPTDSCLPRQVKTFQFDSFIETSRTYLGMESFDEVVRLCDAST
SVTYLESSKQFLQLRKVAPRHNLEIVEGDSNGEFKAEFLVVGKRNPSMPACQKLCQWLDN
CLSTSTHPNPCGIMNTPCQCWETPVRKPGGCYRGGIYQEECIPTPRDTGRDIVRDAEIIK
SWSGWGRWSECSMECGGGVQVRSRACHPEDSVCEGVVEEGRVCNPHPCIGQVRARSQALA
SIVGLKRENADVPSTGVVALQTVDSAAVADEWSPWSVCSVSCGEGWQARTRFCVTSSYST
QCTGPLRENRPCNNTMVCPVDGAWDEWSPWSLCSSTCGRGYRDRTRTCKQPQNGGEPCKG
PIKQTKFCNIAVCPVDGAWNEWSGWTTCSASCSNGTKQRTRECNGPSYGGSECRGDWRET
NNCFLKDCPVDGRWLSWSSWGSCSKTCGGGSKQRQRMCEGPYFGGEPCPGDRGELRRCNE
KRCPEPHEICQEETDGDVVWKRTPAGDMAAVTCPTDSTGLILRRCTLGAVGLAYWENPTY
IKCISKNYQDISTLAQDGVDKAKKGLMTDGISEVISRLRATSDEGTKYSGDLLSIMDVLR
NTTEIYKGAGYSLSNADVENYAQTISNLLKEEHHDKWEEAQLMGANVKEFLQLVEDFVDM
IGMQMKDFQDIYEVTENLVLSIHKRPTAMTTDFTFPVKGWRGMMDWVRTSEEKITVSRDA
LSIDQSEGTTAFVTGIVLYRNLSSILSFQSNSSVLNSKVVTVMVKPTPGLLSTPVEIEFP
HLHNDTINETCISWDERETSSLLGSWSARSCRAVGVDSFRTKCVCDRLSTFAILARINPD
MNMDKNLLPSVTLIVGCGVSSLTLLLLIIIYVSVWKYIRSERSVILINFCLSIICSNALI
LVGQTQARNKVVCGMVAALLHFFFLSSFCWVLTEAWQSYMAVTGRLRNRIIRKRFLCLGW
GLPALVVAVSVGFTKAKGYGTVNYCWLSLEGGLLYSFVGPAAAVVLVNMVIGILVFNKLV
SKDGITDVKLKERAGASLWSSCVILPLLALTWMSAVLAMTDRRSALFQILFAVFDSLEGF
IIVMVHCILRREVQEAVKCRVVDRKDDGNGDSGSSLQNSHHTQLMSDFEKDADSNRPGGM
SSSCEEKMPLPPQLPLPMSSNFHTLPSHTTKAHMQAVPEYSSHTLTLKREKSRLQGGMDP
SSCGKPVYVRDGELFQQLDADLARGQAEGSCPDGSSYLLLPNTTSTLRKAKEDLSKYNIS
VEKLPQTRLVHLSGPFAEPQAAFGLKTLPSDRVSVSYSERDSPVQNIHNMSSESHITHSS
LGDTFDSMNSMMSKSETISTLSMSSLERQKSRYAELDFEKIMHTRKRHQNMFQDLNRKLH
HAEKQDRESPASDSKSVRWSVSSGGSDKTNHSDKQQPQVERPWEGIQRTQHSPPAWVRKD
LEPLAASPLHMQQVEWEKAGATIPMVSQDIIDLQTEV
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtcacctccccggtcggggcccttagtggcccttgtggccctccttttcctc
ggtttgacttccagcatcccatctggcccagcctctgatacctgcgccaccctggagcag
agccgcttcttcgggctgttctcttcgaccgccaacctgccctccacaccgtgctcctgg
accctgcagaacccagaccctcgccgctacaccgtctacatgaagatcaccaagcccacc
gactcctgcctgccccgccaggtcaagaccttccagttcgactcctttatcgagacctct
cgcacctacctgggtatggagagctttgatgaagtcgtccgattgtgcgacgcttcaacg
tctgtaacctacctggagtccagcaagcagttcctgcagctccgtaaggtggcgccaaga
cacaacctggagattgtggagggagacagcaatggtgagttcaaggccgagttcctggtg
gtgggcaagaggaaccccagtatgccagcgtgtcagaagctgtgccagtggctggataat
tgtttgtccaccagcacccatcccaacccctgtggcatcatgaacaccccctgccagtgc
tgggagacccctgtcaggaagccaggtggctgctaccgtggaggcatctaccaggaggag
tgcatcccaactcccagagacactggacgtgacattgtacgcgacgccgagatcataaag
agctggagtggatggggccgttggtctgagtgcagtatggagtgcgggggtggagtccag
gtgcgcagccgagcttgtcatccagaggatagtgtgtgtgaaggcgtggtcgaagagggg
cgggtctgcaaccctcatccctgcattggtcaagtgcgcgcccgtagccaagccctggct
tccattgttggcctgaaaagagaaaacgctgatgttcctagcactggagtcgtggccctt
caaacagtggactctgctgcggttgcagatgagtggtccccctggagtgtgtgttcagtg
agctgtggagagggctggcaggcccgcacccgtttctgtgttacctcctcctacagcacc
caatgcaccggccccctccgcgagaaccgcccctgcaacaacaccatggtctgccccgtt
gatggagcttgggacgagtggtccccatggagcctgtgctcgtccacctgcggccgtggt
taccgtgaccgcacccgcacctgcaagcagccccagaacggaggagaaccctgcaaggga
cctatcaaacagaccaagttctgcaacatcgcagtctgcccagtggacggtgcctggaac
gaatggtccggttggaccacctgctctgcctcttgctccaatggcaccaagcagaggaca
cgtgaatgcaacggaccatcctacggaggctcggagtgccgtggtgattggcgtgagacc
aacaactgcttcctgaaagattgcccagttgacggacgctggttatcatggagctcatgg
ggaagctgcagtaagacctgtgggggaggaagcaagcagaggcagaggatgtgtgaagga
ccttactttggtggagagccttgccctggagacagaggggagctgagacgctgcaacgag
aaaagatgcccagaaccccatgagatctgtcaggaggagaccgatggtgatgttgtgtgg
aagagaaccccagcaggagacatggctgccgtgacctgccctacagattccacaggcttg
atcttgcgccgatgcacccttggcgctgtaggccttgcttattgggagaacccgacctac
atcaagtgcatctccaagaactaccaggacatttccacattggcccaggatggtgttgat
aaggctaagaagggcttgatgactgatgggatttctgaggtgatctcccgactgagggcc
acctctgatgaggggaccaagtacagtggagacctgctgtccatcatggatgtcctcagg
aacaccactgagatctacaaaggagctggatatagcctgagcaatgctgatgtggagaac
tatgcacagacaatcagcaacttactgaaggaggaacatcatgacaaatgggaggaggca
cagctgatgggcgctaacgtcaaggagttcttgcagctcgtcgaggactttgtggacatg
atcggtatgcagatgaaggacttccaggacatttatgaagtcacagagaatttagtgttg
agcatccataagcgccccacagccatgaccactgacttcaccttcccagtgaaaggatgg
agaggcatgatggactgggtcaggacctcagaggagaagatcactgtctcccgcgacgct
ctgtccatcgaccagtctgagggcaccactgcatttgtgaccgggatcgttctatacaga
aacctcagctctatcctgtccttccaaagtaacagcagcgtactcaactctaaggtagtc
acggttatggtgaagcccaccccaggtctgctgtccaccccagtggaaatcgagttcccc
cacctccataatgacaccatcaatgaaacttgcatctcctgggatgagcgtgaaacttct
tcgctgcttggatcttggtctgcgcgtagctgcagagcggtcggggtagattcattcaga
accaaatgcgtgtgtgacaggctctccaccttcgccattttagcgcggataaaccctgat
atgaacatggataagaatctgcttccctctgtgacgctcatcgtaggctgtggggtctcc
tctctcacccttctgctcctcatcatcatctatgtctccgtctggaagtatatccgctcg
gagcgctcagtgatcctcatcaacttctgcctctccattatctgctccaatgccctcatt
ctggttggacaaacccaggctcgcaacaaggtggtgtgtggaatggtggccgccctcctt
cacttcttcttcctctcatctttctgctgggtgctgacggaagcatggcagtcctacatg
gctgtcacgggccgcctgcgcaaccgcatcatccgcaagcgtttcctctgcttgggctgg
ggactccctgctctggtggtggctgtgtctgttggatttaccaaggctaaaggatatggc
accgtcaactactgctggctctcgctggagggtggactcctctactcgttcgttggaccc
gctgctgctgttgttctggtgaacatggtaattggtatcctggtcttcaacaaactggtg
tccaaggacggcatcactgatgtcaaactgaaggagcgagcgggagcgtcactgtggagc
tcctgtgtgattctgcccctgctggccctcacctggatgtccgctgtcctggccatgacc
gaccgccgctccgctctcttccagatcctcttcgctgtctttgactccctagaagggttc
ataatcgtcatggtgcactgcatcctgcgtagagaggtccaagaggcagtgaaatgcaga
gtagttgaccgtaaggacgatggcaatggagattctggcagttccctccaaaatagccac
cacacccagctcatgtctgatttcgagaaggatgctgactccaacagacctggtggtatg
agctcctcctgtgaggagaagatgcccctcccacctcagctgcctctccccatgagctcc
aacttccacaccctgccctcccacaccaccaaggcccacatgcaggccgtgcccgagtac
tccagccacaccctcaccctgaagagggagaagagtcggctgcagggcggcatggacccg
tcctcctgcgggaaacccgtctacgtgcgcgacggcgagctcttccagcagctggatgcc
gacctggcacgtggccaggcggagggaagctgccccgacggtagcagctacttgctcctg
cccaacaccacctccacccttcgcaaggccaaagaggacctgtccaagtacaacatcagt
gtggagaagcttccacagaccaggctggttcatctcagcgggcccttcgctgagccccag
gccgccttcggactcaagacgctaccgtctgaccgggtcagcgtatcctactcggagagg
gactctcccgtccagaacatacacaacatgtccagcgagtctcacatcacccacagcagc
ctaggagacaccttcgactccatgaactccatgatgtccaagagcgagaccatctccaca
ctgtccatgagctccttggagagacagaagtcccgttatgctgaattagatttcgagaag
ataatgcacacaaggaaacgtcaccaaaacatgttccaggacctcaacaggaaattacat
cacgctgagaaacaagacagagagtcccctgcttcagacagcaagtctgtgagatggagt
gtgtcctctggaggaagtgacaaaactaaccacagcgacaagcagcagccacaggtggag
agaccatgggaggggatccagaggacccagcactctccccccgcctgggtgcggaaggac
ctggagcccctggccgcgtcacccctgcatatgcagcaggtggagtgggagaaggctgga
gccaccatcccaatggtcagccaagatatcatcgacctgcagacggaggtctga
DBGET
integrated database retrieval system
