KEGG   Coregonus clupeaformis (lake whitefish): 121571460
Entry
121571460         CDS       T08357                                 
Name
(RefSeq) protein bicaudal C homolog 1-A isoform X1
  KO
K18756  protein bicaudal C
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121571460
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121571460
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_GLD-3_3rd KH_Mug60-KHD4 SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 121571460
NCBI-ProteinID: XP_041738864
LinkDB
Position
1:61087084..61203326
AA seq 993 aa
MAAQCDSLSGYLQQSDHGSNSERSTDSPVPGSEDDLSGPHALPDPEWTEERFRVDRKKLE
IMLLAATGGRVNGGEDFFQKVMDETKTQIAWPSKLKIGAKSKKDPHIKVCGKRDNVREAK
DRIMSVLDTKQTNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAE
KSNQVSIAGQPGGVEAARAKIRELLPLVLLFELPAIVQPDPGSPTVQHISQTYNLTVSFK
PPTRLYGTTGVVRGSQNNSSAVKRGTAMLLEHLAGSLASAISVSTHLDIAPQHHLFMMGR
NGSNIKHITQRTGAQIHFPDPNSPQKKSTVYIQGTIESVCLARQYLMGCLPLVLMFDIKE
DIEVEPQCITALMEQLDVFISIKPKPKQPSKSVIVKSVERNAVNMYEARKFLLGLESNGV
SSAISPITNGPSPTLICPVGLDILASAGLGLSSLGLLGASVPHSLSSSPAPNSVLNSLNS
SMSPMQNPSPSTPSPSPSLWPSSLTSTQSFSSQLMMHPVAQATLSSILLSGVQGYTQNTP
SPPPGLAPIDKQTNGVPDCSKGPCTLNGHVKHPGSVYGRMSSASLADTVLNPNQCDSVQE
ASGHNPSEPRSSKSNQDEGSDTFVEVGMPRSPSHSANGNELKQMLASCKTSGKRQAVELL
QGTKNSHLQYVCPELHSDCLLSDPESSASDSPVTDKRAPGSERAAERAAQQNERDRIRLA
PHSSFANMQVQLEALEYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKE
LRRANHVPYKPTMSTTYEVNSDYEGSPLSLSRSGSREGVGNGSDSENWRDRNGGGNGLPG
HAEFPVSVCSPKRKQNKSAAEHYLSSSNYIDCISSVTGSNGCSLQSSLKGSDLPELFSKL
GLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISGVNDYELNKNRRKL
FEAPIRSSFLEGGASGRLSRQFHADMASVSGRW
NT seq 2982 nt   +upstreamnt  +downstreamnt
atggctgcccagtgcgactctctgagcggatacttgcaacagtcggaccacggctcaaat
agcgagcgtagtactgactccccggtccccggctcggaggatgacttgagcggaccccat
gccttaccagacccggagtggacggaggagagatttcgagtggaccgcaagaaactggaa
atcatgttattagcggccactgggggacgagtcaatggtggcgaggatttctttcagaag
gtcatggatgaaaccaaaacacagatagcgtggccttccaaactgaagatcggagccaag
tccaaaaaagatccgcacattaaggtttgtggaaagagagacaacgtgagggaagccaaa
gaccgaatcatgtcagtcctcgacacaaagcagactaacagggtaacccttaagatggac
gtgtcccacacagagcactcccacgtcatcggcaagggaggcaacaacattaagaaggta
atggaggacacgggctgccacatccacttccccgactccaaccgcaacaaccaggcggag
aagagcaaccaggtgtccattgcaggccagccaggaggggtagaggcagctcgcgccaaa
atcagggagctgctccctctggttttgttgtttgagttgccggccatcgtgcagcctgac
ccaggctcccccacagtgcagcacatctcccagacctacaacctcacagtatccttcaag
ccccccacacgtctctacgggaccaccggagtggtccgcggctcccagaacaactctagt
gccgtcaagaggggcactgctatgctgctggagcacctggcgggaagcctggccagtgcc
atctcagtcagtacccacctggacatcgcccctcagcaccacctcttcatgatgggccgt
aacggcagcaacatcaaacacatcacccagagaacaggagcccagatccacttccccgac
ccaaacagcccccagaagaaatctactgtctacatccagggcaccatcgagtctgtctgc
ctggcgcgccagtacctcatgggctgcctgccgctggtgctgatgtttgacattaaagag
gacatcgaggtggagccacagtgtatcacagctctgatggagcagctggatgtcttcatc
agcatcaagcccaaaccaaagcagcccagcaagtctgtgatagtaaagagtgtggagcgg
aatgcagtgaacatgtacgaggcccggaagtttctgctgggtctggagagcaacggggtg
tcatcagccatctcccccatcaccaacggcccctcccccaccctaatctgtcctgtcggc
ctggacatcctggcctcagctggcctggggctgagcagtctgggcctcctaggtgcatca
gtgccccattctctcagtagctccccggctccaaactctgttctcaacagtctgaactct
tccatgagccctatgcagaaccccagccccagcaccccatctccctccccctcactgtgg
cccagctctctcaccagcacccaaagcttctcgtcgcagttgatgatgcaccctgtagcc
caggccactctgagcagtatcctgctctctggggtccaggggtacacccagaacaccccc
tcccctccccctgggcttgccccaatcgacaagcagaccaacggggtccctgactgctcc
aaaggcccctgtaccctcaatggacatgtcaagcatcctggctcagtctatggtaggatg
tccagtgcgtcactggcagacacggttctgaaccccaaccagtgtgactcagtccaggag
gccagcggacacaacccgtcagaaccccgctccagcaagtccaaccaagacgaaggctct
gacacctttgtggaagtgggcatgcccagaagcccatctcactcagcaaatggaaacgag
ctgaaacagatgctggcttcctgtaagacgtcagggaaacggcaagcggtggagctcctc
caggggaccaagaactcccatctccagtatgtctgtccagagctacactcagactgccta
ctgtcagacccagagtcgagtgcttcagacagccctgtgacagataagagggctccgggc
agtgagcgggcagcagagagggcagcacagcagaacgagagggacaggatccgcttggca
ccacattcttcctttgccaacatgcaggtacaactagaggcacttgaatatgaacagaaa
aagctgttagcaaccaaggccatgttgaagaagcctgttgtgactgaggtgcggaccccc
actaacacgtggagtggtctgggtttctccaagtctatgccagcagagaccatcaaggag
ctgcgcagggccaaccacgtgccctacaaacccaccatgagtaccacctacgaggtaaac
tccgactatgagggctcccccctgtccctctcccgctccggcagcagagagggcgtgggc
aacggcagtgactctgagaactggagagacaggaacgggggtgggaacggacttcccggc
cacgccgaattcccagtgtctgtttgcagtcccaagaggaagcagaacaaatctgctgca
gagcactatctgagcagcagtaactacattgactgtatctcctcggtcaccgggagcaac
ggctgcagtctccagtcctctctgaaagggtcggacctgccggagctgttcagcaagctg
ggcctggggaaatacactgacgtgttccaacaacaggagatcgatctccagaccttcctc
actcttacagaccaggacctgaaagagctgggcatcaccacatttggagcacgcagaaaa
atgctgcttgccatctccggtgtgaatgactatgaactgaacaagaaccgaaggaagctg
tttgaggctcctatcaggtcctccttcctggaagggggagccagcggtcgtctgtctcgt
cagttccacgctgacatggccagtgtcagtggccggtggtag

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