KEGG   Coregonus clupeaformis (lake whitefish): 121571503
Entry
121571503         CDS       T08357                                 
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121571503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121571503
   03016 Transfer RNA biogenesis [BR:cclu03016]
    121571503
   03012 Translation factors [BR:cclu03012]
    121571503
   04131 Membrane trafficking [BR:cclu04131]
    121571503
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121571503
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     121571503
Transfer RNA biogenesis [BR:cclu03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    121571503
Translation factors [BR:cclu03012]
 Eukaryotic type
  Elongation factors
   121571503
Membrane trafficking [BR:cclu04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    121571503
Exosome [BR:cclu04147]
 Exosomal proteins
  Proteins found in most exosomes
   121571503
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Gtr1_RagA
Other DBs
NCBI-GeneID: 121571503
NCBI-ProteinID: XP_041738935
LinkDB
Position
8:complement(7896470..7900574)
AA seq 462 aa
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMGWFKGWKVERKEGGASGVTLLEALDSILAPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
AALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGNFTAQVIILNHPGTISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMVPGKPMCVESFAAYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASTGKVTKSAIKATKAK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggaaaagatccacatcaacattgtggtcattggccatgtcgactccggcaag
tcgaccaccaccggacatctgatttacaaatgcggaggcattgacaagagaaccattgag
aagttcgagaaggaggctgctgagatgggcaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagcgtgagcgtggtatcaccatcgacatttccctgtggaagttc
gagaccgccaagtattacgtcaccatcattgatgcccccggacaccgagactttatcaag
aacatgatcactggtacctctcaggctgattgtgctgtgctgattgttgctggtggtgtg
ggtgagtttgaggctggtatctccaagaacggccagacccgtgagcacgctctcctcgcc
tacactctgggagtcaagcagctcattgttggagtcaacaagatggactctacagagccc
ccgtacagccagaagcggtttgaggagatccagaaggaggtcagcacctacatcaagaag
atcggctacaaccccgccacagttgcctttgtgcccatctctggatggcatggggacaac
atgctggaggctagccccaacatgggctggttcaagggatggaaggtggagcgtaaggag
ggtggcgctagcggtgtgacccttctggaggctctggactctatcctggccccctcccgc
cccacagacaagcccctccgtctgcccctgcaggacgtctacaaaattggcggtattgga
acagtaccagtgggccgtgtggagactggcaccctgaaggccggtatgatcgttaccttc
gcccccgctaatgtcaccactgaggtgaagtctgtggagatgcaccacgagaccctggaa
gcggctctccccggtgacaatgtcggcttcaacgtcaagaacgtgtctgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaagaatgaccccccaatggaggccggcaacttc
acagctcaggtcatcatcctgaaccaccccggcaccatctcccagggctatgcccccgtg
ctggattgccacaccgctcacatcgcctgcaagttcagcgagctcaaggagaagatcgac
cgccgttccggcaagaagcttgaggacaaccccaaagccctgaaatctggagacgccgcc
atcattgtcatggtgccaggaaagcccatgtgtgtggaaagctttgccgcctaccctccc
ctcggtcgtttcgccgtgcgtgacatgaggcagaccgttgccgttggtgtcatcaaggct
gtcgacaagaaggctgccagcactggcaaggtgaccaagtctgccattaaggccaccaaa
gccaaatga

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