KEGG   Coregonus clupeaformis (lake whitefish): 121571530
Entry
121571530         CDS       T08357                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121571530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121571530
Spliceosome [BR:cclu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    121571530
 Complex B
    121571530
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer
Other DBs
NCBI-GeneID: 121571530
NCBI-ProteinID: XP_041738979
LinkDB
Position
8:complement(31097574..31115359)
AA seq 474 aa
MSDFDEFERLLTENKKERDKENWHGRRTPSRSLSRERKKRSRERRKSRESRSDSKDRRRH
RRSTPTQKQSQETVVSRSLALYREKKKKVRKYWDVPAPGFEHITPLQYKAMQAAGQIPAT
ALLPTMITPEGLASTPTSVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGL
TQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGM
SESPCVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGL
SKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGAKNAALTGMNQTPVTLQVPG
LIPTSMASLGGLPTEVLCLMNMVAVEELLDDEEYEEIVEDVRDECGKYGQVKSIEIPRPV
DGLEVPGTGKIFVEFMTLFDSQKAMQALTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgtcggattttgatgaattcgagagactgttgactgaaaataagaaagagcgggacaag
gagaattggcacgggaggcgcaccccgtcccgcagtctcagccgagagaggaagaagagg
agcagggaaaggaggaagagcagggaaagccgcagcgacagcaaggaccgtcgtcgacac
aggcgcagcacaccgactcaaaaacaatcccaagagactgttgtgagtcgctctctagct
ctgtacagagagaagaagaagaaagtgaggaagtactgggatgtcccggcaccaggcttc
gagcatatcacccccctacagtacaaggctatgcaggctgctggccagatcccagccacg
gccctgctgcccaccatgataaccccagaggggctggcctccacccccacctctgtaccc
gtagtgggcagccaaatgaccaggcaggccaggaggctttacgtaggcaacataccgttt
ggcatcacagaggaggcaatgatggatttcttcaacgcccagatgcgcctcggcggactc
acccaggcccctggcaaccctgttctagctgtgcagataaaccaggacaagaactttgcc
ttcctcgagttccgctcggtggacgagacgacccaggccatggcctttgacggcatcatc
ttccagggtcagagcctgaagatcagacggcctcacgactaccagcccctgcccggcatg
agtgagagcccctgtgtctatgtaccaggagtggtttcgaccgtggtgccagactcagcc
cacaaactcttcatcggtggcttgccaaattatcttaatgatgatcaggtaaaagagcta
ttgacctcctttggccctctgaaggccttcaacctggtcaaagacagcgccacaggcctc
tccaagggctacgccttctgtgaatatgtggacgtcaatttgaacgaccaggcaattgca
gggttgaatgggatgcagctgggggacaagaagctcctggtacagagagccagtgttggg
gccaagaacgcagctctgacgggtatgaaccagaccccggtgaccctccaggtgccaggc
ctgatacccacctccatggcctcgctgggtggcctgcccactgaggtgctctgcctgatg
aacatggtggctgtggaggagctgctggatgacgaggagtacgaggagatcgtggaggac
gtccgggatgagtgcggcaagtacggccaggtgaagagcattgagatcccccggcctgtg
gatggcctggaggtcccaggcactgggaagatctttgtggagttcatgaccctgtttgac
tcccagaaggccatgcaggcgctgacaggcaggaagtttgccaacagggtggtggtgacc
aagtactgtgacccagatgcttaccaccgccgagacttctggtag

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