Coregonus clupeaformis (lake whitefish): 121571536
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Entry
121571536 CDS
T08357
Name
(RefSeq) voltage-dependent calcium channel gamma-7 subunit-like
KO
K04872
voltage-dependent calcium channel gamma-7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121571536
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121571536
04261 Adrenergic signaling in cardiomyocytes
121571536
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121571536
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121571536
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GFIT
Motif
Pfam:
Claudin_2
PMP22_Claudin
DUF716
ANAPC_CDC26
L_HMGIC_fpl
Amastin
SUR7
DUF7475
DUF4064
Motif
Other DBs
NCBI-GeneID:
121571536
NCBI-ProteinID:
XP_041738987
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Position
8:complement(30873978..30893067)
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AA seq
348 aa
AA seq
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MSMFSTRALTLLSSVFGACGLLLVGVAVSTDYWLLMEEGVILQQNQSMEVRMALHSGMWR
VCFVAGPEQGRCVASEYFTTEAEIDIVTENTANILKMVRTATPFPMVSLLFVFTAFVISN
IGHIRPQRTILAFISGIFFILSGLSLVVGLVLYISSINDEVMNRPREPEHFFHYHYGWSF
AFAASSFLLKEGAGVMSVYLFMKRYAEEEMYQPHPSLYRPRLSECSDYSGQYLHPESWPP
PQRGRSASEVSSDISIQLNQTPPPPKGSSQQQQQQQQQQQQQQAPSSGPSSGASYQQSSS
SFSYPHHTMSSHPSGPPPQSMPIPMAMPPSAQPPPRYHQHMRMSASPC
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgttcagcacgcgggcgctcacactcctgtcctcggtgtttggggcgtgcggc
ctgctcctggttggcgtggctgtgtccacagactactggctgctgatggaggagggtgtc
attctgcagcagaaccagagcatggaggtcaggatggccctgcactccggcatgtggagg
gtctgcttcgtggcaggacctgaacaggggagatgtgtagcatcagaatacttcaccact
gaagctgagatagatattgtgaccgaaaacactgcaaatatactgaagatggtacggaca
gccacaccgttccccatggtgtcgctgctctttgtcttcactgccttcgtcatcagtaac
atcggacacatccggccacagcgcaccatcctggccttcatctccggaatcttcttcatc
ctctcagggctcagcctggtggtgggcctggtcctctacatcagcagcatcaacgacgag
gtgatgaaccggccgcgtgagcctgagcacttcttccactaccactacggctggtccttc
gccttcgctgccagctccttcctcctcaaagagggggccggggtgatgtcagtgtacctc
ttcatgaagcgctacgccgaggaggagatgtaccagccccacccgtccctctaccgcccc
cgcctgtccgagtgtagcgactacagtggccagtacctgcaccccgagtcgtggcctcct
ccgcagcggggccgcagcgcgtctgaggtctccagtgacatctccatccagctgaaccag
acgcccccgccgcccaagggcagctcccagcagcaacagcagcagcagcagcaacaacaa
cagcaacaggccccatcctctggcccctcctcgggcgccagctaccagcagtcctcctcc
tccttctcctacccccaccacaccatgtcctctcaccccagcgggcctcctccccagtcc
atgcccatacccatggccatgcccccctctgcccagccccctccccgctaccaccaacac
atgcgcatgagtgcctcgccatgctag
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