Coregonus clupeaformis (lake whitefish): 121571537
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Entry
121571537 CDS
T08357
Name
(RefSeq) voltage-dependent calcium channel gamma-4 subunit-like
KO
K04873
voltage-dependent calcium channel gamma-8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121571537
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121571537
04261 Adrenergic signaling in cardiomyocytes
121571537
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121571537
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121571537
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GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
AA_permease_2
HlyIII
Motif
Other DBs
NCBI-GeneID:
121571537
NCBI-ProteinID:
XP_041738988
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Position
8:complement(30853620..30867044)
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AA seq
433 aa
AA seq
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MEAKGRGMPQVMVWWEKGIQVVLTTLGAFAAFSLMAVAIGTDYWLYARAFICNSTANSSQ
DDPNNKDKKDPGALTHSGLWRICCLEGLKRGVCSQINHFPDDADYDQDAAEYLLRVVRAS
SIFPILSAILLLMGAMCVASSSFYKSKRNIILGGGILFVAAGLSNIIGVIVYISAALSDI
SPKKDEDKKWHYSYGWSFYFGGLSFILAEMVGVLAVNIYIEKNKELRCRSRTELLKSTTH
AMLRLPSYRFRRRSRSSSHSTDPPGSPCDTSPTGAKCFALPPSAPPFSVATLPNPHHPGG
GVGGDISMYTLTRDSKMGSLGGGGPPLYGTGDRASLYQLHNYFPKEEVGVMMSGTLPSLS
KSNLSAVGQNAAAGATAIAPLNTLSSSGPAPQQPPLPTGTMERERGMGTLDRLGGKRNRD
TDSDTLNRRTTPV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaaaaggcaggggcatgccccaagtcatggtgtggtgggagaaggggatccag
gttgtcctcaccactttgggggcgtttgcagccttttccctgatggcggtggccatcggg
acggactactggctgtacgcacgggccttcatctgcaacagcacggccaactcctcccag
gacgaccccaacaacaaggacaagaaagaccctggagccctcacccactctggcctctgg
aggatctgctgtctggaggggctgaagagaggagtgtgctctcagatcaatcatttcccg
gacgatgcagactatgatcaagatgcagcagagtatctcctgcgtgtggtccgagcctcc
agtatcttccccatcctgagtgctatactcctcctgatgggggcgatgtgtgttgcatcc
agcagcttctacaaaagcaagaggaacatcatcctaggaggaggcatcctgtttgtggct
gctggcctgagcaacatcattggcgtgatcgtgtacatctctgcggcgctgagcgacatc
tcacccaagaaggacgaggacaagaagtggcattactcgtacggctggtccttctacttc
ggaggcctctccttcatcctggctgagatggtgggcgtcctggccgtcaacatctacatc
gagaagaacaaggagctgcgctgccgctctcgcaccgaactcttgaagagcaccacgcac
gccatgctccgccttcccagctaccgcttccgccggcgctcccgctccagctctcactct
accgacccgcctggctccccctgcgacacctcacccacaggcgccaagtgttttgcatta
ccgccatctgctccgcctttctccgtggccaccctgcccaacccgcaccatcctggtgga
ggagtagggggtgatatctccatgtataccctgacccgggactccaagatggggagtctt
ggtggcggtgggccccccctctacggcacgggggaccgggcctccctctaccagctgcac
aactacttccccaaagaggaagtgggggtgatgatgagcggcacgctgccttctctctcc
aagtccaacctctctgcggtgggccagaatgccgcggccggcgccactgctattgcgccc
ctgaataccttgtcgtcctccgggcctgccccccaacagccacctctacccaccggcacc
atggagagagagaggggcatgggcaccctggaccgcctggggggcaaacggaacagggac
accgactcggacacgctgaacaggagaaccacgccagtgtga
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