Coregonus clupeaformis (lake whitefish): 121571561
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Entry
121571561 CDS
T08357
Name
(RefSeq) POU domain, class 2, transcription factor 2
KO
K09364
POU domain transcription factor, class 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121571561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121571561
03021 Transcription machinery [BR:
cclu03021
]
121571561
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121571561
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
121571561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
121571561
NCBI-ProteinID:
XP_045077845
LinkDB
All DBs
Position
8:29845640..29899833
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AA seq
624 aa
AA seq
DB search
MYHRLDTNSTKYSYYQTSFETSTWKAYEEKQQRTEDKRNSKKTANKNQERKRIMFVPLPV
PFVFQRTASDFSAWRLKSPLALRSSSADIRMSKPAEDEKPGADFPGESTDSERNSPDAND
QVQPMKTSPFSLSSTLSSTKSKSEAGPEMTSTHVPLPSQQQTPHPHTQLMLAGSQLAGLA
ALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAHAAAQANQQQQQQQQQQQQQLTKQE
QTPPQLTLSQPIQLTAQDIQQLLQLQQLVLMPGHHLQSPQFLLPQAQGQQGQQGKWDLLS
LLSTPNLISLPQHQQSQGGILTTPPRQGLQAQCRHGDGLSSLQRDKSGDGGVSSGASAAP
MTSVTSGPHGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLYGNDFSQTTISRF
EALNLSFKNMCKLKPLLEKWLNDAETMAIDSMLPSPSSLSSPMMGFEGMTGRRRKKRTSI
ETNVRVALERNFISNQKPNSEEILLMGRQLNMEKEVIRVWFCNRRQKEKRINPCSATPPL
PSQPPSVMHKPPCYSPHMMSSQGLHQAATSLSTTVTSPSPSATCPLTPSGSATMSSAPSS
VTPPPHSTASPAPPTLSAHSLNAG
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtaccataggctagacacaaactcaaccaaatattcttactaccaaacatcttttgaa
acgtctacctggaaagcatacgaagaaaagcaacaaagaacagaagacaagcgcaattcg
aagaaaactgcaaataaaaaccaagaacgaaagcggatcatgtttgttcccttgccggtg
ccgttcgtctttcagagaactgcttccgacttcagcgcctggcgtctcaagtccccgctg
gctctacgctccagctccgcagatatcaggatgtcaaaaccagcagaggatgagaagcct
ggggcagactttccaggggagagcacagactccgagaggaacagtcccgatgcaaatgat
caggttcagccaatgaaaacgagtcccttcagtctttcttctaccttgagcagcaccaag
agtaaaagtgaggctggccctgagatgacctccacccatgtgccgcttccctcccagcag
cagacacctcaccctcacacacaactcatgttggcagggagtcagctggctgggctggct
gccctcttgcctgcacagcagcagctgttgcttcaacaggcccaggctcagctcctggcc
gccgccgtgcagcagtccaacgcggctcacgctgctcatgccgcccacgcagccgcccaa
gccaatcagcagcagcagcaacaacaacagcagcagcagcagcagttgaccaaacaggag
caaaccccgccccagctcaccctctctcagcctatccagctcaccgcccaggatatccag
cagctgctgcagctgcagcagttagtcctgatgcccggccaccacctgcagtctcctcag
ttcctcctgcctcaggcccagggacaacaggggcagcagggtaagtgggacctactaagt
ttgctctcgacacctaatttaatttcactacctcagcatcagcaaagccagggcggtatt
ctaaccactccacccaggcaaggactgcaagcacagtgtcgtcatggtgacggcctctcg
tcgttacagagggacaagagcggcgacggcggcgtgtcctccggggcctcagccgccccc
atgacttcggtgacctctggcccgcatggcgaggagcccagtgacctggaggagctggag
cagttcgcccgcaccttcaaacagagacgtatcaaactggggttcacacagggtgacgtt
ggcatggcgatggggaaactgtatgggaatgacttcagccagaccacaatctctcgcttc
gaggccctcaacctgagctttaagaatatgtgcaagctcaagcctctgcttgagaagtgg
ctaaacgatgcagagaccatggccatagacagcatgcttcccagccccagctctctctcc
tcccccatgatggggtttgagggcatgacggggcgccgcaggaagaaacgcaccagcatt
gagaccaacgtccgcgtggccttagagcgcaacttcatctcgaaccagaagcctaactca
gaggagatcctcctgatgggcaggcagctcaacatggagaaggaggtgatccgggtctgg
ttctgcaaccggcgccagaaagagaaacgtatcaacccctgcagtgccacccctcccctg
cccagccagcccccctctgtgatgcacaaacccccctgctacagcccgcacatgatgtct
agtcaggggctgcaccaggctgccaccagcctcagcacaacagtgaccagtccatcgccc
tcggcgacctgccctctgacccccagtggctctgcaactatgagctccgccccctcctct
gtgactccgcctccacacagcacagccagccccgcccctcccaccctcagtgcccacagc
ctgaacgctgggtga
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