Coregonus clupeaformis (lake whitefish): 121571595
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Entry
121571595 CDS
T08357
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
KO
K23455
collagen type VIII alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
121571595
NCBI-ProteinID:
XP_041739079
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Position
40:complement(26242585..26316140)
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AA seq
761 aa
AA seq
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MAVPSLSAPLPLLVALLQLAILPLVHAGAYYGHKQHQQHPQQHPQQHQPMPHLSHIGMGG
KEQHPQQQWPGKEMPHMQYPQYRKEIPQMPMHMGKEYPRKGGVVNGGQDKGQTIPSGAAG
GLPGGLPGEQGPAGPPGPEGPAGPPGPPGEGQPGVEGKPGPAGPPGFPGVGKPGLPGIPG
KPGGMGEPGVPGELGPSGGEGQMGQPGTQGPPGPPGLPGIGKPGVGGLPGQPGPKGEPGH
KGLPGLPGLPGPKGDKGIGQPGQPGHKGPVGPPGPPGQGGMPGVGKPGMNGLPGPPGGPG
KPGPPGEEGLAGPTGEGGETGPPGLPGQGKPGQNGLPGQPGMPGGKGHPGPPGFPGKPGL
PGFGKPGFPGPKGDKGMGGMPGGPGPKGDKGHGGLPGVLGPPGTIGPAGPPGPMGPPGGL
GQPGPKGEAGEGGNKGLPGGQGEPGPPGLPGQNGFPGDGGEPGPRGPAGPVGPQGEGGHK
GLPGAPGIPGLSGPKGEGGLPGDKGPQGPKGIPGLGGAGGPIGPPGAPGSKGDSGLPGLP
GVEGKGNPGVPGPLGPPGKEGPGGPPGNPGQPGLPGPPGPPGPPALSPNMGAVLPEMGIP
PGLDGVKTAGYGKKGKYGGNGGEVMGANGLEMPAFTALVTTPFPPVGTPVVFDKILYNGR
QNYNPQTGVFTCDMPGIYYFAYHVHCKGANVWVALMRNDEPVMYTYDEYKKGFLDQASGS
AVLPLQPGDTVYLQLPSDQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgccttccctctcagcccctctccctctccttgtggctttgcttcagcttgca
atactacctctcgtccacgcgggggcatactacggacacaagcagcaccagcagcacccc
cagcagcacccccagcagcaccagcctatgccacacttgtcccacattggcatgggcggc
aaagagcagcacccacagcagcagtggccaggcaaggagatgccccacatgcagtacccc
cagtacagaaaagagatcccccagatgcccatgcacatgggcaaggagtacccccgtaaa
ggtggggtagtcaacggtggacaggacaaaggtcagaccatccccagtggggcagcagga
ggtctccctggaggcctgccaggagagcagggcccagctgggcctccgggacctgaggga
cccgctgggccaccaggacctcctggggaaggacagccaggagttgaaggaaaaccaggc
cccgctggtcccccaggattccctggtgtaggcaaaccaggactcccgggaattccaggc
aagccaggtggcatgggagagccgggagtacctggagagctgggccccagtggtggagag
ggtcaaatggggcagccagggactcagggcccccctggtcctccaggtttgccggggata
ggaaaaccaggggttggggggttgccaggacaaccaggacccaaaggagagccaggacat
aagggcctgccgggactaccaggattaccaggacccaagggtgacaagggaattggacag
ccaggacagccaggccacaaagggccagtaggaccccctggacctccaggccagggaggg
atgcccggcgtgggcaagcctggaatgaatggcttaccggggccaccaggaggaccaggg
aaaccaggcccgcctggagaggaggggctggctggaccaacaggagagggcggagagacc
ggtccaccagggctgccaggccagggaaaaccaggccagaatggtctaccgggacaacca
ggcatgcccggtgggaaagggcacccaggccctccaggtttcccggggaagcctggattg
cccggattcggaaaacccggattcccaggacccaagggagataaagggatgggtgggatg
cccggaggcccaggaccaaagggagacaaaggccatggaggacttcccggtgtgcttgga
ccgcctggaacaatcggaccagctggtccccctggccctatgggaccccctggaggtctg
ggtcaaccagggccaaaaggagaggctggagagggaggtaataaggggctgccaggtggc
cagggtgagcctggtcctcctggactgcctggtcagaacggcttccctggagatggagga
gagccagggccaaggggtcccgctgggcctgtaggaccccagggggaaggcggacacaaa
gggttaccaggtgcccctggcattccaggcctatccgggccaaagggagagggaggactt
ccaggcgacaagggtccccaaggccctaagggcattccaggtctgggaggtgcaggtggg
ccgatcggacctcctggtgcccctgggtctaaaggtgacagcggattacctggtcttccc
ggcgttgagggtaagggaaaccccggtgtccctggtcctcttggacctccaggtaaagaa
ggtcctggaggaccaccaggaaaccctggccagccaggtctacctggtcccccaggccct
cccggaccccccgccctctcccctaacatgggagcagtcctccctgagatgggtattcct
cctgggctggacggagtcaagactgccggctatggcaagaagggcaaatacggaggaaac
ggcggagaggtgatgggcgctaacggcctggagatgcccgcgttcacggctctggtgacc
acgcccttcccaccagtgggcacgcctgtggtgttcgacaagatcctgtacaacggccgt
cagaactacaacccccagacaggcgtgttcacttgcgacatgcccgggatctactacttt
gcctaccacgtccactgcaaaggggccaatgtgtgggtggcgctgatgaggaacgatgag
cctgtgatgtacacgtatgacgagtataagaagggcttcctggatcaggcatcggggagc
gcagtgttacctctacagcccggggacactgtgtacctccagctaccctcggaccaggcc
gcaggactatacgctggccaatacgtccactcatccttctctgggtacttgttgtacccc
atgtaa
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