Coregonus clupeaformis (lake whitefish): 121571614 Help Entry 121571614         CDS       T08357                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04382   Cornified envelope formation cclu04510   Focal adhesion cclu04512   ECM-receptor interaction cclu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cclu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     121571614  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     121571614   09142 Cell motility    04820 Cytoskeleton in muscle cells     121571614  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     121571614  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cclu04147]     121571614    00536 Glycosaminoglycan binding proteins [BR:cclu00536]     121571614 Exosome [BR:cclu04147]  Exosomal proteins   Exosomal proteins of other cancer cells    121571614 Glycosaminoglycan binding proteins [BR:cclu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    121571614 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 FeoB_associated Motif Other DBs NCBI-GeneID:  121571614 NCBI-ProteinID:  XP_045068054 LinkDB All DBs Position 40:complement(25035027..25114310) Genome browser AA seq 1644 aa AA seqDB search MMGHSGTLVLLVALSYTVYRTEAKGCSGSSCGGKCDCSGVKGAKGERGFPGLQGNMGFPG MQGNEGPAGPMGPKGEYGESGTPGMKGTRGSNGLSGFPGNPGLPGIPGQDGPPGSSGIPG CNGTKGDRGTDGQPGFPGLQGPPGIPGLMGLKGDPGGVIGIIPLKGDKGFPGKPGLPGPN GPSGPEGPPGNQGSDGPRGFPGPPGPPGEKGDRLSFQSEKGDKGERGLRGPPGPPGPPSQ EVGGNPVTHYLPGPPGQRGETGDRGEKGSCIPYLNGVKGEQGPPGPRGKPGKDGDNGFKG ERGFPGGPGYHGTPGEKGEKGPPGYVDGAPGAPGPPGLPGLQGERGFPGLQGDLGPPGRH IEGPPGEKGQPGEIGQKGDRGADGESLRGKPGQDGFIGPPGPPGPPGDEPCDPALEKGPP GSSGPPGLQGELGQKGDQGDTCVQCEAFGPPGLPGPQGPKGLQGYPGAAGSKGDKGLPGP TGPDGSPGNSGTPGLIGAPGAHGEPGDIYVAPGLKGDKGGSGFVGTRGLPGVDGLPGKAG LPGLPGPKGEPARDGIKGDRGLDGDPGITGPQGERGPPGVPGFGRPGEPGEKGTSGQAGQ PGIPGQPGLKGEPGKGVSSPGPQGTPGPRGESGRPGLQGDRGPHGDPGMPGFPGQKGDAG VPGIGFPGPPGPKGYSGAPGATGLPGEPGRPGQDGFSGISGTPGPKGEPGRGLPGPKGAQ GPAGVTGFPGEKGNLGLPGIPGQEGHTGPPGAQGIKGDPGLPGQHGGTGPPGPPGAGEPG APGPMGPPGESGLFGRDGVKGDKGFPGSPGLDMPGPQGEKGGSGFPGLSGSKGLTGRPGP AGRDGLPGGAGPKGEMGVMGTPGTPGYQGPAGNPGSPGLRGDPGISGPRGEFGELGPKGE RGEPGLQGPAGNMTDVDMEHMKGEKGDLGDPGDPGYTGEKGYPGQPGVPGMPGKDGEPGT PGQPGVKGDIGVPGEPGSIGYPGNKGGIGEMGYPGSVGPKGDKGIVGTPGHPGFRGTEGV KGDKGKTGLPGVGVPGPPGEKGQSGLPGFPGNAGEKGQKGGMGVPGMPGTSGIKGDTGHI GYQGQPGQPGEKGIGGLPGSPGEPGQTGRPGEPGLQGPPGTTGEKGASGVDGIPGSSGER GDTGLPGRGFSGTPGSSGDKGDKGSPGFPGSPGIPGIPGTRGDKGTPGFEGSQGQPGDRG LPGHAMEGPKGNQGVPGKPGEPGNSGAPGPAGVPGSVGGKGDKGDQGEPGVQGEQGFKGE RGYPGLSGQAGLPGVDGLKGEMGLQGVPGFPGTKGEFGVVGFKGELGDRGFPGDKGNDGP PGPPGPHTFNKGDMGFPGNQGPQGPVGPSGIPGLKGQQGVTGIQGIKGDEGNPGFNGLPG AKGEPGLLGPSGPRGYPGPPGPDGIPGQVGPPGPSSMEHGFLVTRHSQSVEVPQCPEGTS VIYDGYSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTS PEPMPMNMAPITGQSIKPFISRCSVCEAPAMVIAVHSQNIMIPSCPNGWDSLWIGYSFVM HTSAGAEGSGQALASPGSCLEEFRGAPFIECHGRGTCNYYGNSYSFWLATIEDDEMFTKP VPTTQKAGNLRSNISRCQVCMKRT NT seq 4935 nt NT seq  +upstreamnt  +downstreamnt atgatgggccatagtggcacccttgttctgttggtggctctatcctacactgtgtatcgg acagaggctaaggggtgttctgggtcatcgtgcggaggaaaatgtgactgcagcggagta aaaggagcaaagggtgagcgggggtttcctggtctccaaggcaacatggggttcccaggc atgcagggcaatgaggggcccgcagggccgatgggccctaagggagaatatggcgagtct ggaactcctggaatgaaaggaacacgtggatctaatggtttgtcaggcttcccaggaaat ccagggcttccgggtatccctggacaagacggcccccctggatcatcaggtatcccaggg tgcaatggaacaaagggagaccgagggacagatggacagcctgggttccctggtctacag ggtcctcctggtatccctggactaatgggattgaaaggagacccaggtggtgttatagga atcattccactgaaaggagataaaggattccctggaaaaccgggtctaccgggacctaat ggcccctcaggacctgaaggccccccaggaaaccagggatcagacggacccagaggtttc cctggcccacctggccccccaggagagaagggtgaccggctttctttccagagtgagaag ggagacaagggtgaacgagggctccgtggtcctcctggcccccccggacccccatcacag gaagtgggaggaaatcccgttacgcattacctccctggaccaccgggtcagagaggcgag acaggagacagaggagagaaaggttcttgtattccatatctaaatggggtcaagggtgaa caaggcccaccaggaccaaggggaaaacctggcaaagatggagacaatggatttaaggga gagagaggctttcctggcggccctggataccatggaacaccgggtgaaaaaggagagaaa ggacctccaggatatgttgatggtgctcctggggctcccggcccccctggtctcccgggc ttacaaggagaaagaggtttccctggtcttcaaggagatcttggtccaccaggcaggcat attgaaggacctcccggagagaagggccaaccaggagagatcggtcagaagggagacagg ggtgcagacggggagtctctcagaggaaagcctggacaagatggattcatcggaccccct ggtcctcccggacctcctggtgatgagccatgtgatccagcccttgagaagggaccaccc gggtcctccggcccacccggactacagggggagttgggacagaaaggtgatcagggagac acgtgtgtgcaatgtgaagccttcggcccccctggactccccggtccccaggggcctaaa ggactgcaaggataccctggagcagcagggagtaaaggagacaagggactgcctggacct actgggcctgatggaagccctggtaattccggtactcctgggttgataggtgctccagga gcccatggtgagcctggggacatctacgtggctccagggctgaagggtgacaaaggaggg tctggcttcgtgggcacacgaggactcccaggtgtggatggactgccagggaaagctgga ctaccaggcctgcccggacccaaaggagaacctgcccgagatggcatcaagggggaccgt ggtctggatggggaccctgggatcactggaccccaaggagagaggggtcctcctggtgta ccagggtttggccggccgggggagcctggagagaagggtacatctggccaagcaggccaa cctggaatccctggacaaccaggactgaaaggtgaaccaggaaaaggtgtgagttcacct ggaccccagggcacccctggacctcgaggagaatctggcagacctggactacaaggtgac agaggacctcatggagaccctggaatgccaggattcccaggacagaaaggtgacgcaggt gtacctggcatcggattcccaggaccacctgggcctaaaggatattctggagctccagga gccactgggttgccaggagagcctggaagacctggacaggatggtttctctggaatatca ggcacacctggtccaaagggtgagccaggtcggggtctacctggacctaaaggtgctcag ggtcctgccggagtgacaggttttcctggagagaaaggcaaccttggtctacctggtatt cccggacaagagggacacacaggaccacctggagctcagggcattaaaggtgaccccggc ctccctggtcagcatggtggcactggaccccctggaccccctggagcaggagaacctggt gcccctggacccatgggaccccctggagagtcaggcctcttcggtcgtgacggtgtgaag ggtgataagggtttccctggctctcctggtctggacatgcccggccctcagggagagaag ggaggctcaggattccctggactttctggttccaaagggttgacaggacgaccaggcccc gccggcagagatggattgcctgggggggcaggtcccaagggagagatgggagtcatggga acacccggaacaccaggatatcagggtcctgctgggaaccctggaagtccaggactgaga ggtgaccctggtatctctgggccaaggggggagttcggtgagcttggacccaaaggagag aggggagagccaggtctgcagggccctgctggaaacatgactgatgtggacatggagcac atgaagggagagaaaggagacctcggcgacccaggtgaccctggatacacgggagagaag ggttatccaggacagcccggagtacctggtatgccaggaaaggatggcgagcccggtaca cctggtcagccaggtgtgaaaggagacataggtgttcctggagagcccggcagtattggt tatcctggaaataaaggaggcattggtgaaatgggatatccaggctctgtaggtccgaag ggtgataaaggcattgtgggcacaccgggtcatccagggttcaggggtacagagggggtg aagggagacaagggaaaaaccggtctgccaggtgtcggagtaccaggaccccctggagag aagggtcagtcgggtctgcctggtttccctggtaacgcaggagagaagggtcagaaggga ggaatgggggtgcccgggatgccaggaacatcaggaatcaaaggagacaccggacacatc ggttaccaaggtcagccaggtcagccaggagagaagggtattggtgggcttcccgggtca ccaggagagccaggtcaaacaggtcgaccaggtgagcctggtctgcagggtcccccaggt acaaccggagagaaaggagcatcaggagtggacggcatacctggatcatcaggagagaga ggagacacaggtttacccggcaggggcttctcagggacaccagggtcatctggggataaa ggtgacaagggcagtccaggtttcccaggctctccaggtatcccgggtatcccagggacc aggggagacaagggtacgccaggcttcgagggctcccagggccagccaggcgaccggggt ctcccaggacacgccatggaggggcccaaaggaaaccaaggagtgccaggaaagcctgga gaaccaggtaacagtggtgctccaggtcctgctggtgttccaggcagcgtgggtgggaag ggagacaagggagaccagggtgaaccaggagtacagggggagcagggcttcaagggagaa cgaggataccctggactttctggtcaagctggccttccaggtgttgatggactgaaggga gagatgggactgcagggagtgcctggtttcccagggacaaagggtgaattcggagtggtt ggattcaaaggagagctgggggacagaggattcccaggagacaaaggtaatgatggtccc cctggtcctcctggcccccacaccttcaacaaaggagacatgggcttccctggtaatcag ggccctcaggggcctgtggggccctcaggtatccctgggctgaaaggacagcaaggtgtg acaggtattcagggtattaaaggtgatgaggggaaccctgggtttaatggtctccccgga gccaagggagaaccaggccttcttggtccctcaggacccagagggtaccctggaccccca ggacctgacggtattccgggtcaggtgggtcctcctggcccctcctcgatggaacacggt ttcctggtaaccaggcacagccaatcggtggaggttccacagtgtcccgagggaacgtcg gtgatctatgatggatattccctactctacgtccagggcaacgagcgctcccacgggcag gacctgggtacggctggtagctgtctgaggaagttcagtcccatgcccttcctcttctgt aacatcaacaacgtctgtaactttgcctcccgtaacgactactcctattggctcacctcc cctgagcccatgccaatgaacatggcccctataaccggccagagcatcaagcccttcatc agcaggtgttcagtgtgtgaggctcctgccatggtgatagcagtacacagtcagaacatc atgatcccatcatgccccaatggctgggactcactctggattggctactcctttgtcatg cacaccagtgcaggtgctgagggctctggacaggccctggcctctcctggctcctgtcta gaggagttccgtggcgctccgttcatcgagtgtcacggccgtggaacctgcaactactac ggcaactcctacagcttctggctggccacaatcgaggacgacgagatgtttacgaaaccc gtgcccaccacacaaaaggcaggaaatctccggagtaacattagccgttgccaggtgtgc atgaagaggacatag

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