Coregonus clupeaformis (lake whitefish): 121571616
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Entry
121571616 CDS
T08357
Name
(RefSeq) amyloid-beta A4 protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121571616
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cclu00535
]
121571616
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121571616
Peptidases and inhibitors [BR:
cclu01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
121571616
Proteoglycans [BR:
cclu00535
]
Cell surface proteoglycans
Others
121571616
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Others
121571616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
121571616
NCBI-ProteinID:
XP_041739112
LinkDB
All DBs
Position
40:25543157..25582108
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AA seq
735 aa
AA seq
DB search
MGERTAFLLLWVATLTLTSEVPSDDSLGLLPEPQVAMFCGKLNMHVNVQSGKWEPDPSGT
KSCIGTKNGILQYCQEVYPELQSTNVVEANQPVSIQNWCKKGRKQCRSHTHIVVPYRCLV
GEFVSDALLVPDKCKFQHQERMDMCESHLHWHTVAKESCGDRTMNLHDYGMLLPCGIDRF
RGVEFVCCPGDTQRKSDSVELTESDMWWGGTETEYTDNSMPRQADQGAATTEDDEDAFDR
DGDGDEDDDDEDDEDDVTDERDSGERTSNIAMTTTTESVEEVVREVCWARAESGPCHAML
EHWYFVPEKGTCAPFLFGGCGGNRNNFDSEEYCLSVCSTSVLPTKAPSPPGVVDHYLESP
GDYNEHADFQKAKESLEAKHRERMSQVMREWEEAERQAKILPRADKKAVIQHFQEKVEAL
EQEAAGERQQLVETHMARVEALLNSRRRMALENYLSALQANPPRPRQVLGLLKKYVRAEQ
KDRQHTLKHYEHVRMVDPKKAAQIRPQVMTHLHVIDERMNQSLGLLFKVPSVANEIQDQV
SVLMQRVQSELSQQVSSLQSDGRTDVMVSYGNDALMPDQAYSSAPLDPGMGLDRLGFIHP
ESFNQPNTDNHVEPVDARPVPDKVSALKPEEFPEVRMEKERQSASYEVHHQKLVFFAEDV
GSNKGAIIGLMVGGVVIATVIVITLIMLRKKQYTSIHHGVIEVDAAVTPEERHLSKMQQN
GYENPTYKFFEQMQN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagcgaacagcatttctgttgttatgggtggcgaccttgacgctgacatcggag
gtgccatctgatgactcactaggtctgctaccagagccccaggtagccatgttctgtggg
aagctgaatatgcacgtcaacgtccagagtggcaagtgggagccggacccctccggcacc
aagagctgcatcggaaccaagaatggcatcctgcagtactgccaggaggtgtaccctgag
ctccagagcactaacgtggtggaggccaaccagccagtcagcatccagaactggtgcaag
aagggacgcaagcagtgtcgcagtcacacacacatcgtggtgccctaccgctgcctggtt
ggggagtttgtgagtgatgccctgctggttcctgataagtgcaagttccagcaccaggag
agaatggacatgtgtgagagccacctgcactggcacaccgtggctaaagagtcctgtgga
gaccgcaccatgaatctccatgactacggcatgctgttgccatgcggcatcgaccgtttc
cgaggggtggagtttgtgtgttgcccgggagacacgcagcgcaagtcagacagcgtcgag
ctgactgagtctgacatgtggtggggcggtaccgagactgaatacaccgataacagcatg
cctcgccaggcggatcagggggctgccaccactgaggatgatgaggatgcctttgatagg
gacggtgacggtgatgaggatgatgatgatgaagacgatgaggatgatgtgactgacgaa
cgggatagtggtgaacgcacctccaacatcgccatgacaaccaccactgagtcggtcgag
gaagttgtcagagaggtatgttgggcacgtgctgaatcgggcccatgccatgccatgctg
gagcattggtacttcgtgccagagaagggcacctgtgcccccttcctctttggagggtgc
gggggcaaccggaataattttgactcagaggaatactgcctgtctgtctgcagcaccagt
gtgttgcccaccaaggccccctccccccctggcgtggtggaccattacctggagtctccc
ggagactacaacgaacacgccgacttccagaaggccaaggaaagtctggaggccaagcac
cgcgagaggatgtcccaggtgatgagagagtgggaggaggcagagagacaggctaagatt
ctccctcgcgctgacaagaaggctgtcattcagcacttccaggagaaggtggaggccctg
gagcaggaggcagcaggagagcgacagcagctggttgagacccacatggcccgggtggag
gccctgctaaacagccgccgtcgcatggccctggagaactatcttagcgccctgcaggcc
aacccacccaggcctcgtcaggtgctgggcctgttgaagaagtatgtccgtgcagagcag
aaggacagacaacacaccctgaaacactatgaacacgtccgcatggtggaccccaagaag
gctgctcagatccgaccccaggtgatgacccacctgcatgtgattgacgagaggatgaac
caatccttggggctgctcttcaaggtgcccagcgtggccaacgaaatccaagaccaagtt
tcggtcctgatgcagagggttcagtcagagctgtctcagcaagtctcatctctgcagagc
gatgggaggactgatgtcatggtgagctatgggaacgatgccctgatgcctgaccaggcc
tacagctctgcccctctggaccctggcatgggcctggacagactcggcttcatccaccca
gagagtttcaaccagcccaacaccgacaaccatgttgagcctgttgacgctcgtccagtt
ccagataaagtctctgctctgaagcctgaggagttccctgaggtgcggatggagaaagag
aggcaaagcgccagctatgaagtgcatcatcaaaaactggtgttcttcgctgaggatgtt
ggctccaacaagggtgccatcattgggctgatggtgggcggggttgtcatagcgacagtc
atcgtcatcactctgattatgctgaggaagaagcagtacacctccattcatcacggagtc
atcgaggtggatgctgcagtgaccccagaggagcgacacctgtccaagatgcagcagaat
ggttatgagaaccccacctacaagttcttcgaacagatgcagaactaa
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