Coregonus clupeaformis (lake whitefish): 121571708
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Entry
121571708 CDS
T08357
Symbol
marco
Name
(RefSeq) macrophage receptor MARCO
KO
K13884
macrophage receptor with collagenous structure
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121571708 (marco)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121571708 (marco)
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Phagocytosis
Scavenger receptors
121571708 (marco)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Collagen
SRCR_2
DUF3533
Motif
Other DBs
NCBI-GeneID:
121571708
NCBI-ProteinID:
XP_041739279
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All DBs
Position
29:39780033..39788085
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AA seq
442 aa
AA seq
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METSVERGEDHISSFCQSNPLYDLDMKLSRTDMYTFQSSDLKPAKARGAQRCLNVIVIYL
ILLTALNAFLLYKVFSMESSSFSSSGSRTATLTDIHIPLGTDQEEDLRTLARNTSLESTS
LRGDLGRLQTQVTNLCGEDGQLGQLRTDLGVVNASTTLLQDTVKALRFLKAPPGPQGPTG
PPGARGEKGDTGETGQKGDPGVDGQTGANGEPGEPGPKGEDGATGPQGPAGAPDSAATNC
SGPPGLSGPPGPKGDMGHIGLPGIPGQNGTKGDTGVQGRGGLKGARGPKGDTGLIGQPGP
IGPEGPRGPAGVNGTRGFPGFPGLQGSPGSQGPRGEKGERAAGPANVRIAGGGARGRVEV
MWLGQWGTVCDDSFDTLDGTVLCQMLGYQRASTVFTASAGMGKIWFDDLRCKGTETSVFD
CPHNGLGVNNCQHNEDAGVQCV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggagacatcagtagaaagaggagaggatcacatcagctcgttctgccagagtaaccca
ctgtatgacttggacatgaaactgagcaggactgacatgtacaccttccagagcagcgat
ctaaaaccagccaaggccagaggagcacagcgatgtctgaatgttattgtcatttacctc
atccttctgactgcactgaatgccttcctcctgtataaagtcttttcgatggagtctagt
agtttctcctcctctggctccaggacagcgacgctgaccgacatccacatccccctaggg
acggaccaggaggaggacctccgtaccctggccagaaacaccagcctggagtccacctct
ctcagaggagacctggggaggttacagacccaggtcaccaacctatgtggggaggatggc
cagctgggccagctgaggacggacctgggcgtggtcaatgccagcaccactctccttcag
gacacagtgaaagcactcagattcctcaaagctccaccaggcccacagggacctactggt
ccacctggtgcgaggggggaaaaaggagacacaggtgagacaggacaaaaaggagaccct
ggagttgatggccagactggagccaatggagaaccaggggaacccggacccaaaggtgaa
gatggtgccactggaccacaaggaccagctggtgcaccagacagtgcagccactaactgt
tcaggaccccctgggctgtcaggaccaccgggaccaaagggggatatgggacacattggt
ttacccgggataccaggccagaacgggaccaaaggggacactggagtccaggggcgtggt
ggattaaaaggggcccgtggtccgaagggtgacacagggctgataggacaacctggaccc
ataggacctgaaggaccaagaggacctgctggtgttaatggaacaagaggatttcctggt
tttccagggttgcagggaagtcctggaagccaaggtccacgtggagagaagggtgaaaga
gcagctggaccagcgaatgtgcgtattgctggcgggggggctcgtgggagagtggaggtg
atgtggttggggcagtggggtacggtgtgtgacgacagctttgacacactggacgggacg
gtgctctgccagatgctggggtaccaaagagcctctacagtcttcacagccagcgccgga
atgggtaagatctggtttgatgacctgcgctgcaaaggcacagagaccagtgtgtttgac
tgcccccacaacggcctgggcgtcaacaactgtcaacacaacgaggacgctggggtgcag
tgtgtgtga
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