Coregonus clupeaformis (lake whitefish): 121571790
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Entry
121571790 CDS
T08357
Name
(RefSeq) vacuolar protein sorting-associated protein 45-like
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121571790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121571790
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121571790
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Gene cluster
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
121571790
NCBI-ProteinID:
XP_041739409
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Position
8:complement(33846814..33877223)
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AA seq
569 aa
AA seq
DB search
MNVTLAVKQYISKMIENSGPGMKVLLMDKETTSIVSMVYTQSEILQKEVYLFERIDSQNR
ENMKHLKAICFLRPTKENVENLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLSGVAKGRSWEPTLLPRTTQGLTSVLLALKKCPMIRYQLS
SDMAKRLGESVKQIITKEYELFDFRKTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKDLKEVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
EQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERHLMEVSEVEQELACQ
NDHSSASQNVRRLLQNPRVSELDAVRLVMLYALRYERHSSSILPGLMEELNRKGVSERHR
RMVTSMVEYGGKRVRGSDLINPQDAVAITKQFFKGLKGVENVYTQHAPLLQETLDQLIKG
RLKDSQFPYLGPSSLRDRPQDIIVFVIGGATYEEALAIYNLNRSMPGVRIVLGGTTIHNT
KSFLEEVTLTAGAGQAERVQRAGGHPNRR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacacttgctgtcaagcagtatatctccaaaatgatagaaaacagcggacca
ggaatgaaggttctgctcatggataaagagacgaccagcatcgtcagtatggtctacact
caatctgagatcctacagaaggaggtctacctgttcgaaagaatcgactcacagaatcga
gagaacatgaagcacctcaaagccatctgcttcctcaggccaaccaaggagaatgtggaa
aatctgatacaggagctccggcgacccaagtacagtgtctacttcatctacttcagcaac
gtcatcagtaagagtgagataaaagccctggccgaggcggatgaacaggaggtggtcgca
gaagtgcaggagttctatggagacttcattgctgtgaacccacaccttttctccctcaac
ctcagtggtgtggcaaagggtcgtagctgggagccgactctcttgccacgtaccacccag
ggtctgacctcggtgctgctggccctgaagaaatgtcccatgatccgctaccagctgtcc
tcagacatggccaagcgactgggagagagcgtgaagcaaatcatcaccaaggagtatgag
ctgtttgacttcaggaagacagaggtgcctcctctcctgctcatcttggaccgcagcgat
gacgccatcaccccactactcaaccagtggacgtaccaggccatggtgcacgagctgctt
ggcctcaacaacaaccgcattgacctgtcccgagtcccagggatcagcaaggacctgaag
gaggtggtgctgtctgcagagaacgatgagttctatgccaataatctatacctgaacttt
ggagagatcggcacaaacatcaagaacctgatggaggactttcagaagaagaagcccaag
gagcaacagaagctggagtccatctctgatatgaaggcgtttgtggacaactacccccag
ttcaaaaagatgtcgggcacagtgtcgaagcacgtgactgtggtgggcgagctgtctcgc
ctggtgagcgagaggcacctgatggaggtgtcagaggtggagcaggagctggcctgccag
aatgaccactcaagtgcatcacagaacgtgcgtcggctgctgcagaacccgcgggtgagc
gagctggacgcggtgcgcctggtgatgctgtacgcactgcgctacgagagacacagcagc
agcatcctgccgggcctcatggaggagctcaacaggaagggcgtgtcagagaggcatcgc
aggatggtaacgtccatggtggagtatggagggaagagggtgagaggaagtgacctcatc
aacccccaagatgcagtcgccatcaccaaacagttcttcaaggggctgaagggagttgag
aatgtgtacacgcagcatgcaccgttactgcaggagaccttggaccagctgatcaagggg
cggctgaaggacagtcagttcccctacttaggacccagctcccttagagacaggccgcag
gatatcatagtcttcgtcatcggaggggccacctatgaggaggcgctagcaatctacaac
ctgaaccgcagcatgcctggggttcggatcgtactgggcggcaccaccatccacaacacc
aagagcttcctggaggaagtgacattgacggcaggtgcaggccaggccgagagggtgcag
agggcgggtggtcatcccaacagacgctga
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