KEGG   Coregonus clupeaformis (lake whitefish): 121571864
Entry
121571864         CDS       T08357                                 
Symbol
thrap3b
Name
(RefSeq) thyroid hormone receptor-associated protein 3b
  KO
K13112  thyroid hormone receptor-associated protein 3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121571864 (thrap3b)
Spliceosome [BR:cclu03041]
 Complex B
  Other components
   Complex B specific factors
    121571864 (thrap3b)
SSDB
Motif
Pfam: THRAP3_BCLAF1 Methyltrn_RNA_2
Other DBs
NCBI-GeneID: 121571864
NCBI-ProteinID: XP_041739548
LinkDB
Position
8:48127457..48160220
AA seq 979 aa
MSKAPDSPARSRSRSKSRSRSRSYTRSRSRSRSRSRKHRYSSRSRSRSRSHSPSHGRNYP
TRDYQNNQGYQGYQRGYNRGFRRPFYFRGRTRGFYPRRGYQRGGNSYGYRANNWRGGGYR
DGPHRDQDHHGPHSPRRGRSRSRSRTPRKRSGSRSHSRSRYSDRSSSRGSRWSRGRHSSS
RSRSSSPRHHRSSPSSGKPGSKDVKDRATPAEVKGERGEGAVEQAGGKGGEGSSHDKTSA
GKWQGLSDYDTSPKRSSPTVGANQEKSEPKGPLWRTIGSTGSAPSTNSPPGSTKAGPTAS
FSGFGFLGKEDPTRADDKIAISSAFKKFLAENKSKKQQQAAAEWENGRDRDQSTTDGDGR
EKVKSRTSSGLFNITAASFSSKADKSLPFLDKAEEAFLKSQAAGREREREVEEEAKPKGA
TLTTRDVFGKWEDEPHYYLPGKDEERLRDTAEDVEEDLEHMEEELYRSRKQASKKEEKKK
KEKKDKEKSSMSPATATMVPRGSGSREKDRPLALFPVTRVESPLPRPSGKREDFELSINS
FDKMASCSGGLTRERGMSRDLVHPTKKDHGEFRSIFQHIQAAQLRRSPSELFAQHIVTIV
HYIKAQHFSSSGMTLSERFAMYQRKAAEMELMKPRKSPEIHRRIDVSPSAFKRHSHLLEE
LEDCSYKDQGKKPKGDPMDLRLDIERRKRFTGKEPGQHKRDGGKGSGGSRGPSQEGSSEK
SAKRHKKSKKTKKKRDRSPSSSSSSSSPSPFRGGFRGKDHMMGEEVEHMDQGYSKPRFGP
RDYGGPMDRGPPRDYGGPMDRGPPRDCDGHMDKGPPRDYEGHMERGPPRDYEGHMDRGRG
RGGGFLPRVRGGGRGWNRGNYQGNNNSNPPPNMSNAPPERPPDEEWDPEYTPKSRKYYFH
DDREGEKTWLESRGRGRGAFPRSRGRFIYRKGGSSPNKWTHDMFQGDGEEGGEHGEEHHT
EMDQKDNIQAGDPSASKLE
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgtccaaggctccagattcccctgcacggtcccgctccagatcaaagtcccggtccaga
tccaggtcttacacacggtctcgctcgagaagccgctccagatccaggaagcaccgctac
agttccaggtctcgttcccgttccagatctcactctccgtcccacggcaggaactatccc
accagagactaccagaacaaccagggttaccagggttaccagagaggctacaaccgcggc
ttccgcagacccttctacttccgtggtagaacccggggcttctaccctcgccgtggttac
cagagaggagggaacagctacggctacagagccaacaactggcggggggggggctaccgg
gacgggccacaccgcgaccaggatcaccacggtccgcacagccccaggagaggccgctca
cgctcccgctcccgcactcctaggaaacgctcgggcagccgcagccactcgcggtctcga
tactctgaccgctcgtcctccaggggttcccggtggtctcgggggcgccacagctcgtct
cgctcccgctcctcgtccccgcggcatcaccgcagcagccctagctcggggaagcctggc
tccaaggatgtaaaggacagggctacgccagcagaggtcaagggggagagaggagaaggg
gctgtggagcaggcaggaggaaaggggggagagggcagtagtcatgataagacctctgct
gggaaatggcagggtctgagtgactatgacaccagccccaaacgcagcagtcccactgtt
ggtgccaaccaggaaaaatcagaacccaaagggccgttgtggagaaccatcggcagcact
ggcagtgctccctccaccaacagcccaccgggctccaccaaggccgggccgaccgcctcc
ttcagcgggtttggcttccttggcaaggaggatcccaccagggcagacgataagattgcc
atttcctctgctttcaaaaagttcttggcagaaaacaagagcaaaaagcagcagcaggcg
gcggcagagtgggagaatggccgggacagggaccagagcaccacggacggagacggcaga
gagaaagtcaagagcaggactagcagtggcctctttaacataacagcagcctccttcagc
tccaaggctgataagtcccttcccttcctggacaaagctgaagaggccttcctcaagtct
caggctgcagggagagagagagagagggaggtggaagaggaggccaagcccaaaggagcc
accctgacgacacgggacgtgtttgggaagtgggaagacgagccccattactaccttcca
gggaaggacgaggagagactgagagacacggccgaagacgtggaggaagacctggagcac
atggaggaggagctctaccgcagccgcaagcaggcctccaagaaagaagagaagaagaag
aaggagaagaaagacaaggagaagagcagtatgtccccagccacagcaaccatggtccct
aggggttcagggagcagggagaaggacaggcccctggccctgttccccgtcactagggtg
gagtcacccctacccaggccctctggaaagagggaggactttgagcttagtatcaactcc
tttgacaagatggccagctgctctggaggtctgaccagggagcgtggtatgtccagggat
ctggtgcatcccactaagaaagatcatggagagttccgttccatcttccagcatattcag
gctgctcagctcagacgcagcccctcggagctgtttgcgcagcacattgtcaccattgtg
cactacatcaaagcccaacatttcagctcttcaggcatgactttaagtgagcgatttgcc
atgtaccaaagaaaagccgctgagatggaattgatgaagccaaggaagagtccagaaatc
cacaggagaatcgatgtctcccccagtgcgtttaagagacactctcacctgctagaggag
ctggaggactgcagctacaaggatcagggtaaaaaacctaaaggtgacccaatggaccta
cgtctggatatagagcgccgaaaaaggtttactgggaaggagcctgggcagcacaaacgt
gacgggggcaagggctccggaggctcccgaggacccagccaagaggggtcctccgagaaa
tccgccaaacgccacaagaaatccaaaaaaaccaaaaagaagcgtgatcgctctccatcc
tcctcctcttcctcctcctctccctctcccttcagaggagggttcagaggtaaagaccac
atgatgggggaggaggtggagcacatggaccagggctacagtaagcctcgcttcgggccc
cgggactatggaggccccatggataggggtcccccccgggactacggaggcccaatggat
aggggtcccccccgggattgtgatggccacatggacaagggtcccccccgggattatgag
ggccacatggagaggggtcccccccgggattatgagggccacatggataggggccgggga
cgtggaggaggatttctccccagagtgagaggaggtggaaggggctggaacaggggcaat
taccaaggaaacaacaacagcaacccccctcctaatatgagcaacgcccccccagaacgc
ccgccagacgaggagtgggacccagagtacactcctaagagcaggaaatattactttcat
gatgaccgagagggagagaagacgtggctggagagccgtggccggggccgaggggcattc
ccccgcagcaggggacgcttcatctaccgcaaggggggcagcagccccaacaagtggact
catgacatgttccagggggacggggaggaggggggtgagcacggggaggagcaccacaca
gagatggaccagaaagacaacatccaggccggagacccctcagcatccaagctggagtag

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