Coregonus clupeaformis (lake whitefish): 121571893
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Entry
121571893 CDS
T08357
Name
(RefSeq) ATP-binding cassette sub-family F member 1 isoform X1
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cclu03012
]
121571893
Translation factors [BR:
cclu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121571893
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Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_28
nSTAND_NTPase5
AAA_29
AAA_16
ABC_tran_Xtn
AAA_14
AAA
AAA_22
RsgA_GTPase
NACHT
AAA_24
AAA_5
MMR_HSR1
cobW
ATP-synt_ab
AAA_23
AAA_18
DUF4543
Motif
Other DBs
NCBI-GeneID:
121571893
NCBI-ProteinID:
XP_041739611
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Position
8:49938126..49965082
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AA seq
873 aa
AA seq
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MPKKAKEEAEWEGEEGAAPPAVAEKSVKKGKKDKKGKKSFFDELATDNKTEKEDEPVAKE
TQGKQPQKKKKDRRKGKGGEGDDDDDEDVMEKLKKLSVQASEDEEEEVVAPRKGKGNKGG
NIFAALSQGDSDDDDGVAGGDDDEDERRMKEVEKVHKGKKKDKPKPKPKAKAPSDDEAEE
EKKEEDEKKAVKKNKKPEAKPAPKATEEDEAEEEKKETSQPKKGKKEQPKRMNKPARPPR
SEDEEDEEEGEDDEDDTMKCAEDVIAEQEQEKGDDPFANMSKKEKKKKKKMMEYEKQLAS
VRAANAIEGDFSVSQAELSSRQAMLENASDIKLERFSISAHGKELFVNADLLVVAGRRYG
LVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEVIADDTPAVQAVLKADTRRLKLLEE
ERQLQALLEKGEDSVAERLDKVYEELRIIGAAAAEAKARRILAGLSFTPEMQNRATKKFS
GGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWKKTLLIVSHDQSFLDD
VCTDIVHLDNQKLYYYRGNYLTFKKMYVQKQKELQKQYDKQEKKLKDLKAGGKSTKQAEK
QTKEVLTRKQAKGKKKGGVEEESQEATELLKRPKEYTVKFTFPNPPSLSPPILGLHSVDF
AFEGHKPLFKNVDFGIDMETRICIVGPNGVGKSTLLLLLTGRLNPTKGEMRKNHRLKVGF
FNQQYADQLNMEEAATEYLQRNFNLPYQDSRKCLGRFGLESHAHTIQISKLSGGQKARVV
FAELACRQPDVLILDEPTNNLDIESIDALSEAINEYKGAVIIVSHDARLITETACQLWVV
EDRSVNQIDGDFEDYKREVLESLGETLVHKVKE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaaagcaaaagaagaagcagaatgggaaggagaagagggagcagccccacca
gcggtggcagaaaaatcagtaaagaaaggaaagaaggataagaaggggaagaagagtttc
tttgatgagctggccacagataacaaaacggagaaggaggatgaacctgtggcgaaggag
actcaaggaaagcagcctcagaagaaaaagaaagaccggcggaaaggtaaaggtggagag
ggagacgatgatgatgacgaggatgtgatggagaaactgaagaagctgtcagtgcaagcc
agcgaggacgaggaagaagaggttgtggcccccagaaaaggcaagggaaataagggcggg
aacatatttgcagctctcagtcagggagacagtgatgatgatgatggagtggctggaggg
gatgatgatgaagatgagagacggatgaaggaggttgagaaggtgcataagggcaagaaa
aaagataaacctaagccaaaaccaaaagccaaggctccctctgatgatgaggcggaggaa
gagaagaaagaggaggatgagaaaaaagctgtgaaaaagaacaagaaaccagaggctaaa
ccagcacccaaggcaactgaggaggatgaagcagaggaggagaaaaaggagacgtctcag
ccgaagaaaggcaagaaggaacagcccaagaggatgaacaaacctgctcgcccgcctcgc
agcgaagatgaggaagatgaggaagagggtgaagacgatgaagatgacacaatgaagtgt
gctgaagacgtgatcgcagagcaggagcaggagaaaggtgacgaccccttcgccaacatg
agcaagaaggagaagaagaagaaaaagaaaatgatggagtatgagaagcagctggccagt
gtgcgtgctgccaacgctatcgagggagatttctccgtgtcccaggctgagttgtcttcc
agacaggccatgctggagaacgcatcagatatcaagctggagaggttcagtatatcagct
cacgggaaggagctgtttgtcaacgcagacctcctggtggtggcaggaagacgctacggt
ctggttggacctaacgggaaagggaagaccactctcttgaaacatatcgccaacagagct
ctcagtatccctcctaacatcgacgtgctgctctgtgagcaagaggtgatagctgatgac
accccggcggtccaggctgtgttgaaggcagacaccaggcgtctgaagctcctggaagag
gagagacaactccaggctctgctggagaaaggagaagacagcgtggctgagagactggac
aaggtctatgaggagttgaggatcattggggcagcagcagcggaggctaaagcccgtcgt
atcctggctggtctctccttcaccccagagatgcagaaccgagctaccaagaagttctct
ggaggctggaggatgagagtctcactagccagagctctgttcatggagcccaccctgctg
atgctggatgagcccaccaaccatcttgacctcaacgctgtcatctggctcaacaactac
cttcagggctggaagaagactctcctcatcgtgtctcacgaccagagtttcctggacgat
gtgtgtactgacatcgttcatctggacaaccagaaactttattactacagagggaactac
ttgacgtttaagaagatgtacgtccagaagcagaaggagctccagaaacagtacgacaag
caggagaagaagctcaaggatctcaaggctggagggaagtccaccaaacaggccgagaag
cagactaaggaggtcctgaccaggaagcaggcgaagggaaagaagaagggaggagtggaa
gaggagagtcaggaagcaacagagctgctcaaacgacccaaagagtacactgtcaaattc
accttccccaaccccccttctctctctcctcccatcctcggactgcacagtgtggacttt
gcctttgagggacacaaacccctcttcaagaatgtggactttggtatcgacatggagact
agaatttgtattgttggacccaatggagtcgggaagagtaccctactactacttctcact
ggcaggttaaatccgaccaagggggagatgagaaagaaccatcggctgaaggtgggcttc
ttcaaccagcagtatgctgaccagctgaacatggaggaggcagctacagagtacctccag
aggaacttcaacctgccctaccaggacagcaggaagtgtctgggccgcttcggactggag
agccatgcacacaccatccagatctccaagctatcaggtggtcagaaagccagagtggtg
ttcgctgagctggcctgtcggcaacctgacgttctcatcctggatgagcctactaacaac
ctggacattgagtcgatcgatgccttatcagaagctatcaacgagtacaaaggagcggtg
atcatcgtgagccacgatgcccggctgatcactgagacagcctgtcagctgtgggtggtg
gaggaccggtccgtcaaccagatagacggggacttcgaggactacaaacgcgaggtcctg
gaatcactgggggagaccctggtccacaaggtcaaggagtga
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