Coregonus clupeaformis (lake whitefish): 121571918
Help
Entry
121571918 CDS
T08357
Name
(RefSeq) DNA topoisomerase 2-beta-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cclu03032
]
121571918
03036 Chromosome and associated proteins [BR:
cclu03036
]
121571918
Enzymes [BR:
cclu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
121571918
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Topoisomerases
121571918
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
121571918
Centrosome formation proteins
Centriole proteins
121571918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
121571918
NCBI-ProteinID:
XP_041739647
LinkDB
All DBs
Position
8:51415531..51450560
Genome browser
AA seq
1659 aa
AA seq
DB search
MSNGAAGSGGLTWVTLFDKKNAAKKREEEAAAAAAANGRGDGGKPEGGGGGAKKKGGEKM
SVERVYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDEDLGMNLREITYVPGLYKIFDEI
LVNAADNKQRDKNMSTIKISIDPESNTINIWNNGKGIPVVEHKDEKMYVPALIFGHLLTS
SNYDDEQKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWQNNMGKTSDPKIKF
FDGDDFTCVTFQPDLSKFKMEKLDKDIVALLTKRAYDIAGSCKGVKVMLNGKKLPVTGFR
SYVDLYVKDKLDEVGVALKVVNESVNERWEVCLTMSEKGFQQISFVNSIATTKGGRHIDY
VVDQIVAKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKSF
GSKCPLSEKFIRAATNCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAG
GKHSSECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEIN
NIIKIVGLQYKKSYEDPESLRSLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHT
FLEEFITPIVKVNKNKQEFAFYSIPEFDEWKKQTVNFKTWHIKYYKGLGTSTSKEAKEYF
ADMEKHRIMFRYAGTEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGT
QAKHLSYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCMKRNDKREVKVAQLA
GSVAEMSAYHHGEQSLLMTIVNLAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIFT
MLSPLAKMLFPAVDSSLLKFLFDDNQKVEPEWYIPILPMVLVNGAEGIGTGWACKIPNYD
HREIVNNLYRMLNMQDPLPMLPSYKNFKGVIHELGQNQYMVSGEISVLDKNTIEITELPV
RTWTQAYKESVLEPMLQGTEKTPALINDYKEYHTDQTVKFVVRMSEEKLAQAEAAGLHKV
FKLQSSLTCNSMVLFDHMGCLKRYDSVQDILKEFFELRLHYYKLRKDWLVGSLGADASKL
SNQARFVLEKIEGKITIENKSKRDLIRMLVQKGFESDPVAAWTKAQEKALEEDDRDGNDS
DSSVDSGSSSGPNFNYILNMPLWCLSKEKVDELLRQRDIKKGELNELQRKSPEDLWKEDL
AVFIEELDKIEAQEQADMSAGKGTKLVKGKVGKPKVKKLHLEETFPSPYGRRVVPTITQA
MKTDASKKMTKKKKGDADLVMKMEFDDEMGVLGSDGGTGENSLNSSFNPPASAPAKPKAP
RVKREKKEPGAPRARKTPTPKGASGKKLKKRNPWSEDESKSESDLEDSEPVVIPRDTKSQ
RASAAKPKYTFDFSEEEDGGEEEDEEEEDDDAASSPARPCKDDFTASSETKDRYNDHSND
EDDEDIFPLPKQTTTIVSPAKKKKEPESIFSSSKSACSSEKSNDSDDLKLDSDGEDKAFS
SYSSSSAFNKPVPAKKAVKKPSDAAPKPRKAPVPKAPTKQKLDTSVWDSDSDTGSKKPAP
ALKGKGGGRKRKQSGSDEDDFSPKKAPGKAPKAPTSRKPSKKAAAAPSPMSDDDVDSNRF
SQSGVESRDRPGRGRAKKEVKYFAESASGSDDDQYDMFD
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacggcgcagcaggaagtgggggtctgacttgggtgaccctctttgataagaag
aatgctgccaaaaagagggaggaggaggcagcggcggctgcggctgcgaacggcaggggc
gatgggggcaagcccgagggaggaggtggaggagccaagaagaagggaggagagaagatg
tcagtggagagggtgtaccagaagaagacccagctggagcacatcctgctgaggccagac
acctacatcggctctgtggaacctgtcacccagcaaatgtgggttttcgatgaagacctt
gggatgaatctacgagaaatcacctacgtccctggattatacaaaatctttgatgaaatt
cttgtcaacgcggccgacaacaaacagcgagataagaacatgtcgaccataaagatctcc
attgatcctgagtccaacaccataaacatctggaacaatggtaaaggcatccccgtggtg
gaacacaaagatgagaagatgtacgttcctgctctcattttcggacacctcctcacctcc
agtaactacgacgacgagcagaagaaagtcacaggtggaaggaacgggtacggtgctaaa
ctctgcaatattttcagcacaaagttcacagtggaaaccgcctgcaaagagtacaaacac
agcttcaaacagacctggcagaacaacatggggaagacgagcgaccccaagatcaagttc
tttgacggggacgacttcacgtgtgtgaccttccagccggacctgtccaagttcaagatg
gagaagctagacaaggacatcgtggctctgctcaccaagagggcctacgacatcgctggc
tcctgcaagggcgtcaaagtcatgctcaacgggaagaaactccctgtgacagggttccgc
agctatgtggacctgtacgtgaaggataagctggacgaggtgggcgtggccctaaaggtg
gtcaacgagtccgtcaacgagcgctgggaagtgtgtcttaccatgagtgagaagggattc
caacagatcagcttcgtcaacagtatcgccaccaccaagggtggcagacacattgattac
gtggtggaccagatcgtagccaagctgatagaagtggtgaagaagaagaacaaagctggt
gtctcagtcaaacccttccaggtgaagaaccacatctgggtgtttgtgaatgcgttgatc
gagaacccgacctttgactcccagaccaaggagaacatgactctccagaccaagagcttt
ggttctaagtgccctctgtctgagaagtttatcagagcggcgactaactgtggcatcgtg
gagagtatcctgaactgggttaagttcaaggcccagacacaactcaacaagaagtgttct
tcagtgaagcacagcaagattaaaggcatccccaagctggatgacgccaacgatgccggt
ggtaaacactcttcagaatgcactctgatcctgactgagggagactcagccaagtccctg
gccgtctccggcctcggcgtcatcgggcgagatcgctatggtgtcttcccactaagagga
aagatcctgaatgtacgagaggccacacacaaacagatcatggagaacgcagagatcaac
aacatcatcaagatcgtgggtctgcagtacaagaagagctacgaggacccagagtctctg
agatccctacgctacggcaagatcatgatcatgaccgatcaggatcaagatggctcccat
atcaagggtttgctcatcaacttcttccatcacaactggccatccctgctcaaacacacc
ttcctggaggagttcatcacgcccatcgttaaggtgaacaagaataagcaggagtttgct
ttctacagcattccagagtttgacgaatggaagaaacagacggtcaactttaaaacctgg
catataaagtactacaaaggtttgggtaccagcacaagcaaggaggccaaggagtacttt
gcagacatggagaaacaccggatcatgttcagatacgccgggacagaggacgatgctgcc
atcacactggcgttcagtaagaagaagactgacgacaggaaggagtggctcaccaacttc
atggaggacaggagacagaggaggatgcacggcctgccagagcaatacctgtacggcacg
caggcgaaacacctctcctacaacgacttcatcaacaaagaactcatcctcttctccaac
tccgacaacgagagatccatcccatccttagtcgacggtctgaagccaggtcagaggaag
gtgctgttcacctgtatgaagaggaatgataagcgggaggtgaaggtggctcagctggct
ggttcagtagcagagatgtctgcctaccatcacggagagcaatccctgttgatgacgatt
gtgaacttggcccagaactttgtgggcagcaacaacgtgaacatcctgcagccgctgggt
cagtttggtacccgcatcaacgggggcaaggacgctgccagcccccgttacatcttcacc
atgctcagtcccctggccaagatgttgttcccagcggtggactccagcctgctgaagttc
ctattcgatgacaaccagaaggtagagccagagtggtacatacccatcctacctatggtg
ctggtgaacggggccgagggcatcgggacgggctgggcctgcaagatccctaactacgac
cacagagagatagtcaacaacctctaccgcatgctcaacatgcaggaccctctgcccatg
ctgcccagctataagaactttaaaggagtgatccatgagttgggccagaaccagtacatg
gtcagtggggagatctctgtcctggacaagaacaccattgagatcactgagctgcccgtt
cgcacctggacacaggcctacaaggagtctgtactagagcccatgctgcaggggacagag
aagactccagctctgatcaatgactataaggagtaccacacagaccaaaccgtcaagttt
gtggtccgcatgtcagaggagaagctggcccaggcagaggctgcaggactacacaaagtc
ttcaagctacagtccagcctcacctgcaactcaatggtgttgtttgaccacatgggctgt
ctgaagaggtatgactcggtccaggacattctcaaggagttctttgagctgcggttgcac
tactacaagctcaggaaggattggctagtggggagcctgggggcggatgcttccaaactg
tccaatcaggcacgatttgtgctggagaagatcgaaggaaagatcacaatcgagaacaag
tctaagagggatttgatcaggatgctggtgcagaaaggctttgagtcggaccccgtggcg
gcatggaccaaagcacaggaaaaggctctggaggaggacgatcgtgacggtaacgacagt
gacagctctgtggactctgggtcgtcgtcgggaccaaacttcaactacatccttaacatg
cctctgtggtgcctgtccaaggagaaggtggacgagctgctccgacagagagacatcaag
aaaggagagttgaatgagctgcagaggaagtctccagaggacctgtggaaggaggacctg
gctgtcttcattgaagaactggataaaatcgaggcccaggagcaggcagacatgagtgca
ggtaaaggtaccaagctggtgaagggcaaggtgggcaagcccaaggtgaagaaactccac
ctggaggagacgtttccctcgccatacggccgcagggtcgtacccactatcacacaggcc
atgaagactgacgcctccaagaagatgaccaagaagaagaagggtgatgcggacctggta
atgaagatggagtttgatgatgagatgggagtgctggggtcagacggaggaacaggggag
aactccctcaactcatcctttaatccaccagcctcagccccagccaagcccaaggccccc
cgggtcaaacgggagaagaaggagccaggtgctcccagagccaggaaaacccccacaccc
aaaggagcatctggtaagaagttgaagaagcggaacccctggtcggaggacgagtccaaa
tcagagagcgacctggaggacagtgaacctgtggtcatcccccgagacaccaagtcacaa
cgggcctcagcggccaagcccaagtacacctttgacttcagtgaggaagaggatggagga
gaggaagaggatgaggaggaggaggatgatgatgctgcgtcctcgccagcccggccctgc
aaagatgacttcactgcctcctccgagactaaagaccgatacaacgaccacagcaatgat
gaggatgatgaagatatcttcccactgcccaaacagaccaccaccatcgtctcaccagca
aagaagaagaaggaaccagagagtatattctcctcctctaaatcagcctgctcctctgaa
aagagcaacgacagtgatgatctgaagttggacagtgacggggaagacaaggccttctct
tcatactccagcagctctgccttcaacaaacctgtcccagctaagaaagcagtgaagaag
ccttcggatgcagctcccaaacccaggaaagcaccagtacccaaagcgccaacaaaacag
aagctggacacgtctgtctgggactcagactcagataccggctccaagaagcctgcacca
gcactcaaaggtaaaggcggagggaggaagaggaagcagtctggatctgatgaggatgat
ttcagtcccaagaaggctcctgggaaagcacccaaagcccctaccagcaggaagccatca
aagaaagcagccgcggccccatccccaatgtcagatgatgatgtggactccaaccgtttc
agccaatccggcgtggagtcccgagaccgaccgggcagaggcagggccaagaaggaagtg
aagtactttgctgagtcagcatcagggtcagacgacgatcagtacgacatgttcgactag
DBGET
integrated database retrieval system
