KEGG   Coregonus clupeaformis (lake whitefish): 121571925
Entry
121571925         CDS       T08357                                 
Name
(RefSeq) splicing factor 3A subunit 3
  KO
K12827  splicing factor 3A subunit 3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121571925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121571925
Spliceosome [BR:cclu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    121571925
 Complex B
    121571925
 Complex C
   U2 SnRNP specific factors
    121571925
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 121571925
NCBI-ProteinID: XP_041739658
LinkDB
Position
8:51982428..51997725
AA seq 501 aa
METILEQQRRYHEEKERLLDAKTKEMMHKKTTLREQINSDHRTRAMLDRYMDVSSTVREA
YEDKDGMRKDELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSMEFDELVKARENP
TEETQNMVEFSDEEAYGRYLDLHDCYRKFVNLKGAEKLEYISYLSSFDQLFDISKDRKNA
EYKKYLEMLLEYLQDYTERVKPLLDQNDLYGKILGEFEKKWEMGTFPGWPKETSSALTHA
GAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGKSLESLDPSL
FAKNPKSKGPKKDTERNKEIAFLESQIYEYVEILGEQRQLTHENVQRKQARTGEEREEEE
EEQLSESESEDEDNEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPK
AFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWSKLKSQKASERWQPDTEEEYE
DSSGNVVNKKTYEDLKRQGLL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggagacgattttagaacaacaacggcgctaccatgaggagaaggaaaggctgttggat
gccaaaacaaaggaaatgatgcataagaaaaccacgttacgcgaacaaataaactcagac
catcgaacaagagcaatgttagatagatacatggacgtgagttcaactgtcagggaagca
tatgaagacaaagatggtatgaggaaggatgaactgaatgccatctcaggaccaaatgag
tttgcagagttctacaacagactaaaacagatcaaggagttccacaggaagcatcctaat
gagatatgtgtgcccatgtccatggagtttgatgagctggtcaaggctagagagaaccca
actgaagaaacacagaacatggtggagttcagtgatgaggaggcgtacggacgctacctg
gatctccatgactgctatcggaagtttgtcaacctgaaaggggcggagaaactagagtac
atcagctacctgtcctcgtttgaccagctgtttgatatctccaaggacagaaagaacgct
gaatacaaaaagtacctagagatgctactggagtaccttcaggactacacagaaagagtc
aaacctctgctcgaccagaatgatctctacggcaagatcctgggagagtttgagaagaag
tgggagatggggaccttccctggctggccaaaagagacgagcagtgctctgacccatgcc
ggagctcatctggacctttctgctttctcctcttgggaagagttggcttccctgggtctg
gacaggttgaagtctgcccttatggccctgggcctgaaatgtggaggaaccctggaggag
agagctcagaggctgtttagcaccaaaggcaaatccctggaatctctggatccctccctg
ttcgccaagaaccctaagtccaagggacccaagaaagacacagagcgtaacaaagaaatc
gccttcctggagtctcagatttatgagtatgtggaaatcctgggggagcagaggcagctg
acccatgagaacgtgcagaggaagcaggcccggacaggagaggagagagaggaggaagag
gaggagcagctcagtgagagtgagagtgaagatgaggacaacgagatcatctacaacccc
aagaacctgcctctcggctgggatggaaagcccattccatactggctgtataaactccat
gggctgaacatcaactataactgtgagatctgtggaaactacacatataggggacccaag
gccttccagaggcactttgcagagtggcgtcacgcccatggcatgcgctgcctgggaatc
cccaacactgctcactttgccaacgtcacccagatcgaggacgctgtctctctgtggtca
aagctgaagtcacagaaggcatcagagcggtggcaaccagatacagaggaggagtacgag
gactccagtggaaacgtggtcaacaagaagacctacgaggatctgaagagacagggtctg
ctgtag

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