Coregonus clupeaformis (lake whitefish): 121571960
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Entry
121571960 CDS
T08357
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121571960
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121571960
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121571960
Protein phosphatases and associated proteins [BR:
cclu01009
]
HAD phosphatases
Fcp/Scp phosphatases
121571960
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121571960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
Biotin_lipoyl
PTCB-BRCT
BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
121571960
NCBI-ProteinID:
XP_045077919
LinkDB
All DBs
Position
8:complement(36113454..36219806)
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AA seq
1032 aa
AA seq
DB search
MEEPADSVGGGAAQGPTAQVAEIRCPMAARPMRLLEWKVKPGSLVNVDSVLALCAPIPPE
KEDGSQPPEQPNRLPGKKLKSDRAGVVKDLCCQLGQVISPGGVIVRVEECSHPVVMKGLC
AECGQDLTQMQSNNGRQQAHISMANVSMVHSVPELMVSSEEAEQLGREDQQRLHRNKKLV
LMVDLDQTLIHTTEHHCQRMSNKGIFHFQLGRGEPMLHTRLRPNCKDFLEKIAKLYELHV
FTFGSRLYAHTIAGFLDPEMKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDR
EDVWKFAPNLITVKKYIYFQGTGDINAPPGSKEAQQGRKAGSQASRPAEASEPAVTSGSS
GRSSASEEQSNGLKKQRAKDHNNGGREESTAPSATQEAAANERTQPDGGEAVEEGRGQGE
GAEASTAAQVSHRTSVEEEGEDGSRTVGSGEEAPPPPSSTPPDLHEPNSNLDFDLSSDSD
SVRGKPPSSDSEGESSQTRKSKPEGAEQVAVEEPSGGAGGKEEGDIKEKSTGENSSEGVG
EKSGLVLPPDPEQENGRSERREAETESQNSEQSGVTMEEESLDPSMEEEEEEELDKDDHL
IYLEEVLERIHGEYYARYDAFLRKECPETPDIRKIVPELKARSLEGTTIVFSGLYPTNYP
MERTRENYHAKALGAKLGKGLLLSSKDPGRTTHLIAARAGTEKVHQAQGCKHLHVVNPDW
LWGCLERWERVDESLYPLKEDCTKTQRSNSPATFPDHQGSFQNPLFPNAPLHHHRPPPAA
PEVRTYDPVTGKLIRRGPQAARPQSYLQASMSAAHGDQTSLRGSQKDQQGETAGPSSRDE
EQPGPSCRRRERQPSMSETNPLYTFCKEDLDSMDKEVDDMLDEESDEEGEGRGKKTREME
EEGEMEEEEEMEEEEEGQRPKGSGQSTEGGKHHQRHHEQQHHHQLQQQGLATVVEETAKT
QAPPSDQGGTTTTDSVPRGQKRKLTEAKEEEVEEERESADESTKDSNEEEEGSSSEADEM
AAALDAELNDFM
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcccgctgactccgtcggtggcggggcagcacagggccccacagcgcaagtg
gcagagatccgctgtccaatggcagcgcgtccaatgcggctgctggaatggaaagtcaaa
cccgggtccctcgtcaatgtggattcggtgttggcgttatgtgcgcccatcccgccggag
aaagaggacgggtctcagccgccagaacagcccaacaggctgccagggaagaaactgaaa
tcggaccgagctggagtggtgaaggacctatgttgtcaacttggacaagtcatatcgcct
ggtggtgtgattgtcagagtagaagaatgcagtcatcccgtcgtgatgaaggggctgtgt
gctgaatgtggccaggacctcacacagatgcagagtaataatgggaggcagcaggctcat
atctccatggcaaacgtttccatggtgcacagtgtccctgagttgatggtcagctctgag
gaagcagagcagctgggcagagaggaccagcagagactccacaggaacaagaagctggtt
ctgatggttgatctggaccaaaccctgatccacaccactgagcatcactgccagcgcatg
tccaataagggaatcttccacttccagctggggcggggggagcccatgttacacacgcga
ctgcgtccgaactgcaaagacttcctggagaagatcgccaagctctacgagctgcatgtc
ttcactttcggaagccgcctctatgcacacaccatcgcaggcttcctggaccctgagatg
aagctgttctctcacaggatcctgtccagagacgaatgcatcgaccccttctccaagaca
gggaacctaaggaatctgttcccgtgtggtgactcgatggtatgtattatagatgatcgg
gaggacgtgtggaagtttgctcccaacctgatcactgtgaagaagtacatctacttccag
ggcacaggagacatcaatgccccgcccgggtctaaagaggctcagcagggaaggaaagcc
ggcagccaggccagccgaccagcagaggcctcggaaccagcagtaacgtcagggtcttct
gggaggtcgtctgcatcagaggagcagagtaacggtcttaagaaacaacgggcaaaagac
cacaacaacggagggagggaggagtcaacagctccctcagccactcaggaagcagcagcc
aatgaacggactcaaccggacgggggtgaggctgtggaggaggggcggggtcagggcgag
ggtgccgaggccagcacggcagcacaggtgagccacaggacgagtgtggaagaggagggg
gaggatggcagcaggacagtgggctcaggggaggaagctccccctcctccatcctccact
cctccagacctccatgagcccaacagcaaccttgactttgacctgtccagcgactctgac
tctgttaggggtaaacccccctcatcagacagcgagggggagtccagccagaccaggaag
tccaaaccggaaggggcggagcaggtggcagtagaggagccatcaggcggggctggagga
aaggaggagggggatattaaggagaagagcactggggagaacagctcagagggagtaggg
gagaagtcagggcttgtcctccctccagatccggagcaggagaatgggcgctcagaacgg
agggaggctgagacagagtcccagaacagtgaacagtcaggagtcacaatggaggaggag
tctctggacccgagcatggaggaggaggaagaggaggagttggacaaggatgaccacctc
atctacctagaagaggtgttggaacgtatccatggagaatactacgcccgctacgacgcc
ttcctcaggaaggaatgcccagagacgcctgatatcaggaagatcgtcccggagctgaag
gcccggagcctggagggcaccaccattgtgttctctgggctgtaccccaccaactacccc
atggagagaaccagggagaactaccacgccaaggccctgggagcaaagctaggcaagggc
ctcctgctcagctctaaagacccaggcagaaccacgcacctcattgctgctagagcaggt
acagagaaggtgcatcaggcccaaggctgtaaacatctccatgtggtgaatcctgactgg
ctgtggggatgtctggagcgctgggaaagggtggatgaatcactgtatccactgaaggag
gactgcaccaagacccaacggagcaacagcccagccacgttccctgaccaccaagggtcc
ttccagaaccccctgttccccaacgcccccctccaccaccaccgcccccctccagctgcc
cctgaggtgcggacgtacgacccggtcacggggaagctgattcgccgcgggcctcaggcc
gccagaccacaatcttacctccaggcctccatgtctgctgcccacggcgaccagacctcc
ctcagggggagtcagaaggaccagcagggggagacggcgggtccctccagtcgagacgag
gagcagcctggaccctcctgccgccggagggaacgccagcccagcatgtcagagaccaac
cccctctacacattctgtaaagaagatctggacagcatggacaaggaggtggacgacatg
ctagatgaggagagcgatgaggagggagaaggccgggggaagaagactagggagatggag
gaggaaggggagatggaggaggaagaggagatggaggaagaagaggaggggcagcggcca
aagggtagtggacagagcactgagggagggaagcaccaccaacggcaccacgagcagcag
caccatcaccagctgcagcagcagggtctggccaccgtcgtagaggagacggcgaagaca
caggcgccacctagtgaccagggcggtacgacgacgacggacagcgtgccaaggggacag
aagcgcaagctcactgaggccaaggaggaggaagtggaggaagagagggagtcggcggac
gagtccaccaaggattctaatgaggaagaggaaggaagcagctcagaggctgatgagatg
gccgctgccctggatgcggaacttaacgacttcatgtga
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