Coregonus clupeaformis (lake whitefish): 121571967
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Entry
121571967 CDS
T08357
Name
(RefSeq) partitioning defective 6 homolog gamma-like
KO
K06093
partitioning defective protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121571967
09144 Cellular community - eukaryotes
04530 Tight junction
121571967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121571967
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
121571967
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
121571967
NCBI-ProteinID:
XP_045077918
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All DBs
Position
8:35949711..35988714
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AA seq
448 aa
AA seq
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MNRSFNKSQSSLQYLDCIAVEVKSKYGAEFRRFSVDRFKPGKFEEFYKLIMHVHRIANME
VMIGYADIHGDLLPINNDDNFCKAVSTAHPLLRVFIQRQEEVDYSSYGTHSLTRKKKAVV
VLRNDVNRKRPHIRIGMPQDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTS
VRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVTGKTLDQVTDMMIAN
SHNLIVTVKPVNQRNNVVRASRISGSSGQSSDSSGSTGYPSLSTAAMATGAHGYADELES
DEESDIVIESSLKRPSRRSNASVVSVASTTSRSHIQAPPPAPVEYPSPPTRPLSVVSTAS
FHSQPSLNGLSHHGSLSYMLHRDLNLQHPQYQPHTLQHHHPQHHSSNPALRESNDSLHKI
LSTMRTDPRHSLALPRGGVEEDGTVITL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagtttcaataaatcccaatcttccctgcaatacttggattgcatcgcggtt
gaagtgaaaagcaagtatggagcagagttccggcggttctccgtggaccgtttcaaaccg
gggaagttcgaggagttctataagctcatcatgcacgttcaccgcatcgccaatatggag
gtcatgattggctacgctgacatccacggagacctgctgccaatcaacaatgacgacaac
ttctgcaaggcggtgtctacagcccacccactgctccgggtcttcattcagagacaagag
gaggtcgactacagcagctatgggacccactctttgacccggaagaagaaggctgtggtg
gtgctgcggaacgacgtcaacaggaagcgacctcacatccgcatcggaatgccacaggac
ttccggccagtctcctccatcatcgatgtggacatcttgccggagtcccaccgccgtgtt
cgtctctaccgccatggctccgacaaacccctggggttctacatccgggacgggaccagc
gtaagggtgacgccccatggcctggagaaggttcctgggatcttcatctcccgcatggtg
cctgggggcctggctgagagcacaggcctgctggctgttaacgacgaggtcctggaggtc
aatggcatcgaggtgactgggaagacattggaccaggtgacggacatgatgattgccaac
agccacaacctgattgtcacagtgaagccggtgaaccagcggaacaacgtggtgcgagcc
agccggatctctggcagctccggtcagtcgtcagacagcagcggttccaccggctacccc
agcctgtccaccgcagccatggcgaccggcgcccacggctacgccgacgagctggagagc
gacgaggagtcagacatcgtcatagagagcagcctcaagcggccgtcgcggcgctccaac
gcatcagtggtgtccgtggcatcaacaacatcacgctcccacatccaagcccctccccca
gctcccgtggaataccccagcccccctacccgacccctctctgtggtttccaccgcctcc
ttccactcccagcccagcctaaacggcctctcccaccacggtagcctcagctatatgctg
cacagggacctgaacctccagcacccccagtaccagccccataccctccagcaccaccat
ccccagcaccacagtagcaacccagccctccgggagagcaacgacagcctgcacaaaatc
ctcagcaccatgaggacggaccctcgacacagcctggctctgccccggggaggggtggag
gaggacggcaccgtcatcaccctataa
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