Coregonus clupeaformis (lake whitefish): 121571972
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Entry
121571972 CDS
T08357
Name
(RefSeq) ras/Rap GTPase-activating protein SynGAP isoform X1
KO
K17631
Ras/Rap GTPase-activating protein SynGAP
Organism
cclu
Coregonus clupeaformis (lake whitefish)
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Paralog
GFIT
Motif
Pfam:
DAB2P_C
PH_RASGAP
RasGAP
C2
PH
DUF2130
Motif
Other DBs
NCBI-GeneID:
121571972
NCBI-ProteinID:
XP_041739719
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Position
8:35407664..35499492
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AA seq
1361 aa
AA seq
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MSYVSSQDGRCASPLSSRPQTPSNGLAYDPLGWNPCRLMRTGSQCYMFDQEEVHPLLMRE
RRSGSQRSERTKLLRRTVSVPVEGRHQHPEIEHTRARRKSIATARQPSMETPPTAPPQPF
RQQSFLSRKLKGSIKRTKSQPKLDRTSSFRHMILPRFRSADQERTRLMQSFKESHSHESL
LSPSSAAEALDLTLDEDAVIKPVHSSILGQEYCFEVTTISGTKCFACRSAAERDKWIENL
QRAVKPNKDNSRRVDNVLKLWIIEARDLPPKKRYYCELCLDDMLYARTTSKPRTDTVFWG
EHFEFNNLPAIRSLRLHLYKETDKKRRKEKSTYLGLVTIPISSITGRQFVEQWYPVIQPS
ALAKGGGVGGGKVINASIRLKSRYQTMSILPMELYKEFAEYITNNYRTLCAVLEPLLSVK
SKEEVAFALVHILQSTGKAKDFLSDMAMCEVDRFMDRQHLIFRENTLATKAIEEYLKLIG
HRYLKDAIGEFIRALYESEENCEVDPMRTPPSVLADHQANLRMCCELALCKIVNSHCVFP
RELKDVFASWRVRCAERGREDIADRLISSSLFLRFLCPAIMSPSLFNLTQEYPGERTSRT
LTLIAKVVQNLASFSKFSGKEDHMCFMNEFLEMEWGSMQQFLYEISNMDTGSNAGGFEGY
IDLGKELSVLHSLLWEVMAQLSKDAILKLGPLPRLLNDISVALRNPQLHRQASHQTDRQQ
DRLITRPSSNRLVSSDFQSLMMRDLNSSIDISRLPSPTSALSGGGVLSSHVSMGSFVERD
PRGSKDVFYVTRPPLARSSPAYCTSSSDITEPDPKVLSVNKSVSMMDLQDSRMNSISNLH
SVGDMLNSSQASIAGLGHSFGNLGGPLRMGGHMSAGGSGGSGLRLSQMGGPLHHMGGPTD
SLSQQQQHAAAAMHFPLSFQNPLFHLAADGPRGQPHSRPQAQPPPPPLLLAPELDNAHHQ
QGYMRAFGHGGFSRSEDLSALRPQSSLVQPSIVHSHSYSDDYTRQNQNAEYAQRQLSLQV
QENLQQQILMGMTPQTATGTGTPTSLATPPSTVHPVRHGSVAPPPPQRLKSQLSISPGAT
STPPKARPQSRNLLLQSPESSFGGRQPSPQQQQQQQLSVKPSDCPAPGLPHQSSSARDGQ
GAPQGGNGETTDTPTKSTKQPQTTDTPTKSTKQPQQQSQQQPPQQHLLKPTVNKQGSQSP
STLTPNERTVAWVSNMPHLSADIEILRSSSNLEDLKMKEYSKSMDESRMDRVKEYEEEIH
SLKERLIMSHRKLEEYERRMLSQEQQTSKILSQYQNRLDDSERMLRQQQLEKDSQIKGII
NRLMAVEDELRVSAIPEIKPRMFREQICQPIQPFYGGHPGT
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatgtctcctcgcaagatggaaggtgtgcctcccccttgtcctcgcggccccag
accccttccaatggcctggcttatgatccgctgggttggaacccatgtcgcttgatgaga
actgggagtcagtgctacatgtttgaccaggaggaggttcaccctttactgatgcgtgag
cgtcgctcaggctctcagcgcagtgagcgcaccaagctgctccgaaggacagtcagtgtg
ccggtggaggggagacatcaacaccccgagatagagcacactcgcgctcgcaggaagagc
attgccactgcgagacagccaagcatggaaacccctcccactgcccccccacaacccttc
agacaacaaagcttcctcagtcgaaagttgaagggctccatcaagaggacaaagagccag
cccaaactggatcgaaccagcagcttccgccacatgattctaccccgtttccgtagtgct
gatcaggagaggacccgtctaatgcagagcttcaaggagtcccactctcatgagtccctg
ctctcccctagcagtgcagcagaggctctggacctcacgctggatgaagatgctgtcatc
aaacctgtccactccagcatattgggccaggagtactgctttgaggtgaccaccatttca
gggacaaaatgctttgcctgccgctcggccgctgagagagacaaatggattgagaatcta
cagagagctgtcaagcccaacaaggacaacagtcgaagggtggacaatgtgcttaagctg
tggatcattgaggccagggaccttccgcctaagaagcggtactattgcgagctgtgtctg
gatgacatgctgtatgcgcgcaccaccagcaagccgcgcacggacaccgtcttctggggc
gagcactttgagttcaacaacttgcctgccattcgtagcctacgcctgcacctttacaag
gagacagacaaaaagagacgcaaagagaagagcacgtacctcggcctagtcactatcccc
atatcgagcatcacaggcaggcagtttgtggagcagtggtacccggtgatccagcccagt
gctttggctaagggtggcggtgtaggcggtggcaaggtcatcaatgcctcaatccgtctc
aagtcccgctaccagaccatgagtatcctgcccatggagctgtacaaggagtttgccgag
tacatcaccaataactaccgtacgctgtgtgccgtgctggagcctctgctcagtgtcaaa
agcaaagaggaggtggcgttcgcgctggtgcacattctccagagcacaggcaaggccaag
gacttcctttcagacatggcgatgtgcgaggtggatagattcatggacagacagcatctg
atctttcgagagaacacccttgctactaaagccatagaggagtacctcaaattgataggg
caccggtacctcaaggatgccataggggagttcattcgagcattatacgagtcagaggag
aattgtgaagtggatcccatgcgcactccaccgtctgtcctcgccgaccaccaagccaat
cttcgcatgtgctgtgagctggcactctgcaagattgtcaactctcattgtgtgtttccg
cgggagctgaaggatgtctttgcctcatggagggtcagatgtgccgagcggggaagggag
gacatcgcagaccgcctcatcagctcctccctctttctacgcttcctgtgtcccgccatc
atgtcgccctctctcttcaacctcacccaggagtaccccggagagcggacatcccgcact
cttaccctcatcgccaaggtggtgcagaacctggccagcttctccaagtttagtggcaaa
gaggaccacatgtgtttcatgaatgagtttttggagatggagtggggctccatgcagcag
ttcctgtacgagatctccaacatggacacggggagcaacgccgggggcttcgagggctac
atcgacctgggcaaggagctgtcggtgctccacagcctgctgtgggaagtcatggcccaa
ctgagcaaggacgctattctgaagcttggccccttgccacgtctgctgaatgacatcagt
gtagccttgaggaacccccagctccaccggcaggccagccaccagacagacagacagcag
gacaggctcatcacacggccttcctccaatcgcctggtatcatctgatttccagagcctc
atgatgcgggatctcaacagctcaatagacatctcccgtctcccctccccaacctcggca
ttatctgggggtggggtcctctcgtctcacgtcagcatgggaagctttgtggaacgagac
ccccgcggttcaaaggacgttttctacgtgacccgtccccccttggctcggtccagccct
gcgtactgcaccagcagttctgacatcactgagccagacccaaaggtcctcagtgtgaac
aaaagtgtgtccatgatggacctgcaggactcacggatgaacagcatttccaacctccat
tcggtgggcgatatgctcaactcctcccaggcctccatagcaggcctgggccacagtttc
gggaacctgggtggcccgcttcgcatgggaggccacatgtccgctggcggctcggggggc
tctggcttgaggctgagccagatggggggacccctccaccacatggggggtcccaccgac
tctctctcccagcagcagcagcatgcggcagccgccatgcacttccccctctccttccag
aaccccctcttccatctggctgccgacggccctcggggtcagccccacagtcgtcctcag
gcccagccacctccccctccgctcctgctggccccggagcttgacaatgcccaccaccaa
cagggctacatgagggcattcggccacggtggcttctcgcgcagcgaggacctgtcggcc
ctgcggccacagagcagtctggtgcagcccagtattgtccattctcacagctacagtgac
gactacacgcggcagaaccagaacgctgaatacgcccagcgccagctttcgctgcaagtg
caggagaatctccagcagcagattcttatgggcatgacccctcagacggcaacaggcaca
ggcactcccacctccttggccactcccccttccaccgtgcaccctgtccgtcatggctcc
gtagcaccgcctcccccgcagcgcctcaaatcccagctgtccatcagccccggggccacc
tccacccctcccaaggcccgcccccagagcaggaacctccttctccagtcgcccgagtcc
agctttggcggcaggcagccctctccgcagcaacaacagcagcagcagctgtctgtcaaa
ccgtctgactgcccagcccctgggctcccgcaccagtcgagctctgccagggacggccag
ggggcaccacaagggggcaacggagagaccacagacaccccaactaagagcaccaagcag
cctcagaccacagacaccccgactaagagcaccaagcagcctcagcagcagtcccagcag
cagcctccacagcagcatctgctcaagcccacagtcaataaacagggttctcagtccccc
tccaccctgacccccaacgagcgcactgtggcctgggtgtccaacatgccacacctctct
gccgacattgaaatattgcgtagctcatctaaccttgaggacctcaagatgaaggagtac
tccaagagcatggacgagtcacgcatggatagggtaaaggaatacgaggaggagatccat
tctctgaaggagcgcctgataatgtcccatcggaagctggaggagtatgagcgcaggatg
ctttcacaggagcagcagaccagcaagatcctatcgcagtaccagaaccggctggacgac
agcgagcgcatgctgaggcagcagcagctggagaaggacagccaaatcaaaggcatcatc
aacaggctgatggctgtggaggatgagttgagagtgagtgccattcctgaaatcaagccc
agaatgttcagagagcagatctgtcagccaatccaaccgttttacggaggacaccctgga
acctga
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