Coregonus clupeaformis (lake whitefish): 121571985
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Entry
121571985 CDS
T08357
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 beta isoform X1
KO
K09049
cyclic AMP-dependent transcription factor ATF-6 beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04141
Protein processing in endoplasmic reticulum
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121571985
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121571985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121571985
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
121571985
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GFIT
Motif
Pfam:
bZIP_1
bZIP_2
YabA
bZIP_Maf
DUF724
DUF4140
DUF6262
Motif
Other DBs
NCBI-GeneID:
121571985
NCBI-ProteinID:
XP_041739753
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Position
8:56450852..56462297
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AA seq
705 aa
AA seq
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MTTDLLSDLDSRFFADNLLTSEDWDACLYQCESMEEGEDGEYTRGLKYETSFDNDLVLTL
DPDNPTSPWRHLDDNLLTGDSPVLKDKMTITQPLPVDMLFRVKAEPPSPASSLASDCSLT
SLQDSQITVKGENPPTPPYMFGDVLSPPLGTCEVTVASAQHAQPQSQLPPQPQQHQTAAN
NGIDAQATVHPTAATIKASTILSSKPPIQPRPVCVAALPVPQAPSPAKALILHSLPSMDQ
SRPVVLSQSVCLGSAPAIVKMEPVSPTMPHGHCPTAPFPSKPIVPASSLPGNNGIDVSVC
QSHVSQSMKVMKRQQRMIKNRESACQSRKKKKEYLQNLEGQLREAQQENERLRRENQALR
ERLAGKEGSESGNNKRAVCVMAVLLFMTFSFGPVSITDRKLETGLQEEVVPHTGRHLMEF
EAAQEHSRVEERMDPEEEGGEDGWKGGEEERESTDSYQFRNLSDVFSDVKDLVLQDIGRY
FTSNDCRQFNRSESLRLADELRGWVHRHQIERKMSGGKPKIVKKARIAQKAQLRKTNFSR
YLPIQTHRSIESQIQVFPAGPEISYSDFMDAIDRREDTFYVVSFRRDHLLLPAISHNKTT
RPKMSLVMPAMSVNESLYNKSQGYEMMMQVDCEVMDTRIIPIKASAVPPSLRDPPPAPPA
HHHHSNHTSLRGRHHPHTGGTASPRQPLPVRRREAEYYISQGGGV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgactacggatttactatctgatttggatagtcgtttcttcgctgataaccttctgaca
agcgaagattgggatgcctgtctgtaccagtgtgagagcatggaggagggagaggacggg
gagtacacgagaggactgaaatatgaaacatcgtttgacaacgatctcgtgctgactctt
gatcccgacaatcccacgtcaccatggagacacctggacgacaaccttctcacaggggac
agtcccgtattgaaagataaaatgacgataacgcagcctttgccagtggacatgttgttc
cgggtgaaggcggagcctccctcccctgcctcctcgctggcctcagactgctccctgacg
tcactccaagactcacagatcacagtgaaaggggagaacccgcccacacctccttatatg
tttggagatgtgctgtcaccaccacttggcacatgtgaagtcacagtggcctccgcacaa
catgcccaaccacagtcccaactgcccccacagccacagcaacaccaaaccgcagccaac
aatggcatcgacgcacaggccacagtccaccccactgcggccacgatcaaagccagtacc
atcctgagcagtaagcctcccatccagcccaggcctgtgtgtgtagcagctctccccgtc
ccccaggctcccagtccagccaaggccctcatactgcacagcctgcctagcatggaccag
agcaggcctgtggtgctttcccagtctgtctgtctggggtctgctccagccatcgtcaaa
atggagcctgtctctcccaccatgcctcacggccattgccccacggccccattccccagc
aaacccatagtcccagcgtcctctctgccagggaacaatggcatcgatgtgagtgtctgt
cagtcacatgtcagtcagtcaatgaaggtgatgaagaggcagcagaggatgatcaagaac
cgggagtcggcgtgccagtcacgcaagaagaagaaggagtacctgcagaacctggagggc
cagctgagggaggcgcagcaggagaacgagcgcctccgcagggagaaccaggccctgagg
gagaggcttgccgggaaagagggcagtgagtctgggaacaacaagagggccgtctgcgtc
atggcagtgctactctttatgaccttcagtttcggccctgtcagtatcacagacaggaag
ctggagacggggttacaggaagaggtggtccctcacacaggaagacatctcatggagttt
gaggcggctcaggaacacagcagagtggaggaaaggatggatcctgaggaggagggagga
gaggatgggtggaagggaggagaggaagagagggaatccactgattcatatcagtttagg
aacctgagtgacgtgttcagcgacgtgaaggacttggtcctgcaggacatcggccgctat
ttcacctccaatgactgcaggcagttcaaccgttccgagtccctcaggctggcggatgag
ctgagaggatgggttcacaggcaccagatcgaaaggaagatgtctggagggaagccaaag
atagtgaaaaaagctagaatagcgcagaaggcacagctaaggaagacaaacttctcaaga
tatcttcccatacagacccatcgttccattgaaagtcagatacaagtgttccctgctggt
ccagagatcagctacagtgacttcatggacgctattgaccggcgtgaggacaccttctac
gtggtctccttcagacgagatcacctgctgttgccagccatcagccacaataagaccaca
cggcccaaaatgtctctggtgatgccagctatgtccgtcaatgagagtttatataataaa
tcccagggatatgagatgatgatgcaggttgattgtgaggtcatggacacacggataatc
ccaatcaaagcctccgctgttcccccgtccctccgcgacccccctcctgctccccccgcc
caccatcaccatagcaaccacacctctctccgaggccgccaccatccccacaccggcgga
acggcatccccacggcaacccttacctgtcagaagacgggaggcagagtattacatcagc
caggggggcggggtttga
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