Coregonus clupeaformis (lake whitefish): 121571998
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Entry
121571998 CDS
T08357
Name
(RefSeq) F-actin-uncapping protein LRRC16A-like isoform X4
KO
K20493
leucine-rich repeat-containing protein 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121571998
Membrane trafficking [BR:
cclu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
121571998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
PBP-Tp47_c
Motif
Other DBs
NCBI-GeneID:
121571998
NCBI-ProteinID:
XP_041739776
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Position
8:57010223..57052366
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AA seq
1376 aa
AA seq
DB search
MTEEDTDFPNELLESVRDAVGGKIKLTLKKRVKLEVKGDKLENRVLALASHRAFLLTARV
PTKIEQTFNYLDIQGITSNKPTQLLLEYDRGQLSLKLGSVEDVDEVVAHIGTCLHRICPG
LSPVKVMKKLTLKPPERTAALQSLWEDQATTDLGPCGGFSHMYWCLCDQLGLPFREEVQW
DVDTIYLTQDTRELNLQDFVHLENRDLVAIIVVLEYNQWFTKLSTKDYKLSTDVCEQILR
VVARSSRLEELVLENAGLRSDFAQKLANALAYNPASVLHTLNLTNNSLEDKGLSALSAQL
AKLPMGLKHLNLSKTSISQKGVNSLAQALSANPVVPTTITHLDLCGNSLRGDDLSNLYNF
LGQPNSLVTLDLSNSDCCLDQVCTSLLRGSLKHLSVLNMSKSVFSHRRSKDVPHSFKQFF
GTALALSSVNLSGTKLPLEALKALLLGLGCNPNLSEVSLDLSSSELRSGGSQILEGCIAE
IPNISSLDISDNGLDSDLTTLLVWLAKNRSIRHLSLGKNFNNIKSKNLSQVLDNLVHMIQ
EEESPLTSLSLADSKLKGDLSIVLNALGSNTSLIRVDISGNGMGDMGAKMLAKALQINTK
LRTVMWDKNNVSLQGLQDVAAALEKNHTIRFMPIPIIDAAQALKASPEKTEDALLKMEQY
LLRNHETRKYLQEQAYRLQQGIVTTTTQQMMDMICVKVQDHLNSLRYTETDVIQEDMKVA
KNLMKDARNSKRLLPNLYHVRGSLGGMGGPIQDKLESMAGEMAKVMDEQLQTLLQSMVDT
AEGLCPHVMMRSNLHQELMKAGAGRMTVPCSFITTTLLEQSGVDIINKISEVKLSMASFL
SDRIVDEILESLSRSQNTLAEHLTRKPQPLLHQELKETEVLEETVLQPEAQTQEQRQHHA
ERLEEMDTCVSKRKSILCRMLRPVSVAFEMEFDLDKALEEVPIHEEDPPHPPPLDKKPTY
FGELPTMEARKLEHHTKLRPKPKKRANPSRAPREPICTSPPPEVEKNDLLGKVDEGVDEF
FYKKITKLSFKRPTLRGSSNIQEGSEKKRESRKSGFLNLIKSRTSKSEKSHGTAAITTPA
SATVSTVTEEPLSPKAPLWDHSEISPDHTKKQPTPELTDEQHLESDSKGSPHGGRHFGVP
IMGPIMCMDLLAEMRKMHEKMAAHKSDSSDNADGKQGKPESQTSSIDLSSIAPRSKPTSV
TLRPPAPQSIKPHMGPHTLGLLSPGSSHSPDDTPDSPLGNVSPKGPLPAPRLKKAPSDYE
REGESSHINVELTGDSSPFDLDQETDRSAIDGRQWSSLKRSTSVAQEVEGRERTKSLPAS
VRPSSMVDLAHYQSPGVFAKDNNTEEDFPPPPDTDQRQDLRPDNMEEDTIDDDIPV
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaagatacggattttcctaacgagttgctggagagtgtgagagatgccgtg
ggagggaagatcaagctcaccctgaagaagagggtgaaactggaggtcaaaggtgacaaa
ctggagaaccgagttctggctttggcatcccatcgggcctttctgcttactgcaagggtc
cccaccaagattgaacagaccttcaattacctggatatacaggggatcactagtaacaag
cccactcagttgttgttggagtatgaccgaggccagctgtccctgaagcttggctctgtg
gaggatgtggatgaggtggtggcccacattgggacctgtctacacaggatctgtccaggc
ctgtccccagtgaaggtgatgaagaagttgaccctgaagcctcctgagaggacggccgcc
ctacagtctctctgggaggaccaggccaccacagacctagggccatgtggtggtttctcc
cacatgtactggtgtctctgtgaccagctgggtctgccattcagagaggaggtgcagtgg
gatgtggacacaatctatctaacccaggacaccagagaactaaacctacaggattttgta
catcttgagaacagagatttggtggccatcattgtggtcctggagtataaccaatggttc
accaagctctccacaaaggactacaaactgtccacagatgtgtgtgaacaaatcctgcga
gttgtggcccgctctagtcgcttagaggagctggttttagagaatgccggtctcagaagt
gatttcgcacagaagctagccaacgctctggcctacaaccctgcctctgtccttcacacc
ctcaacctcacaaacaactccctggaggacaagggtctatctgctctcagtgcacagcta
gccaaactcccaatgggtctcaagcatttgaacctttcaaagacttccatatcgcaaaaa
ggggttaacagtcttgcccaggcgctgagtgccaaccctgttgtccccactaccatcaca
cacctggacctctgtgggaactcactccgaggagacgatctctcaaatctgtacaatttc
ctgggtcaacctaacagtctagtaactctggatctgtccaacagtgactgctgtctggac
caagtctgcacttcacttctacgaggttctctcaagcacctctcagtgcttaacatgtct
aagagcgttttctctcacaggagaagtaaagatgtgccgcattccttcaagcagttcttt
ggcacagcactggcgctgagcagtgtcaacctatctggaaccaaactccctctggaggca
ctcaaagcacttttactaggtcttggctgcaatcctaatctcagtgaagtgtcactggat
ctcagcagctctgagctaagatctggaggctctcagattctggagggctgcatagctgag
attcccaacatctccagcctggacatctcagacaacggtttggattcagacctgaccact
ctcttggtgtggctggccaaaaatcgctccatccgccacctctcactgggcaagaacttc
aataacatcaagtccaaaaatttgtctcaagtcttagacaacctggtgcacatgatacag
gaggaggaatcgcccctgacgtccctctccctggccgactccaagctgaagggagatctc
tccatcgtgctgaacgctctgggcagcaacaccagcctgatccgggtggacatcagtggc
aacggcatgggagacatgggggccaagatgctggccaaggccctacagatcaacaccaag
ctccggacagttatgtgggacaaaaacaatgtcagcctacaaggcctccaggatgtggca
gctgctctagaaaagaaccacaccatccgcttcatgcccatccccatcatcgatgcagcc
caggccctcaaggccagccctgagaaaacagaggacgccctactaaagatggagcagtat
ctcctaaggaaccacgagactcgaaaatacctccaagagcaagcttaccggctccagcaa
ggcattgtcacgacaaccacacaacagatgatggacatgatctgtgtaaaggtgcaggac
cacctgaactccctgaggtacacagagaccgacgtcatccaggaggacatgaaggtggcc
aagaacctcatgaaggatgccaggaactccaaaagactgctgcccaacctgtaccacgtg
aggggctctcttggtggcatgggcggccccattcaggacaagctggagtccatggcagga
gagatggccaaggtcatggatgagcagctacagacgttgttgcagtctatggttgacaca
gctgaaggcctctgtccccatgtgatgatgaggagcaacctgcaccaggagctgatgaag
gccggcgcaggcaggatgaccgtcccctgtagcttcatcaccaccacactactggaacag
tcaggagtcgacatcatcaacaagatcagtgaagtgaagctcagtatggcgtccttcctc
tcagaccgtatcgtggatgagatcctggaatctctgtcccgttcccaaaacactctggca
gaacacctgaccaggaaaccgcagcctcttctccaccaggagctcaaagagacggaggtg
ctggaggagacggtcctccaacctgaggcccagacccaggagcagaggcagcaccatgct
gagaggctggaggagatggacacctgtgtgtccaagaggaagagcattctctgcaggatg
ctgcggcctgtatctgtggcctttgaaatggagtttgacttggacaaggccctggaagaa
gtgcctatacatgaggaagacccgccccatcctcccccattggacaagaagccgacgtac
tttggcgagctgcccactatggaggcccgaaagctagagcatcacaccaagctccgcccc
aaaccgaaaaagagggccaaccctagccgagcaccacgggaaccaatctgcacctctcca
ccaccagaagtggagaagaacgacctcctgggaaaagtggatgagggtgttgatgaattc
ttctacaaaaaaatcaccaaacttagttttaaacgacccaccctgaggggctcctccaac
atccaggaggggtcggagaagaaacgggaatcccggaaaagcggcttccttaacctcatc
aagtctcgcacctccaagtctgagaagagccatggaacagctgccatcaccaccccggct
tctgcgaccgtcagcactgtgacagaggagcccctgtcccccaaggctccgttgtgggac
cactccgaaatctcccctgaccacacaaaaaagcagccaacccctgaactcactgatgaa
cagcacttggagagtgacagtaagggtagtcctcatggtggccggcactttggggtcccc
ataatgggccccataatgtgcatggacctcctggctgagatgagaaaaatgcatgagaaa
atggccgcccataagtctgactcttcagacaatgcagatggtaaacaaggaaagccagag
agtcaaacatcgtcgatagacttgtcgtcgatagcgcccaggtctaaacccaccagtgtt
acactcagacccccagcaccccagagcatcaagccccacatgggaccacacactttggga
ctcctgagccctggcagcagccacagcccagatgatacccctgactcccctcttggcaac
gtatccccaaaaggaccactgcccgcccctcgcctgaagaaggcaccctcagactatgag
agggaaggggagagtagccacattaatgttgaactcacaggagactccagcccatttgac
ttggaccaagagacggacaggtctgctattgacgggagacagtggtcctccctgaagcgc
tccacttctgtggcacaggaagtagagggtcgagagcgcaccaagtccctccctgcatct
gtgagaccttcatccatggtggaccttgcccactaccaaagccctggggtgtttgctaaa
gacaacaacaccgaagaggacttccctcctccccctgacacggaccaaagacaggacctc
aggcctgacaacatggaggaggacaccatcgatgacgacatcccagtgtag
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