Coregonus clupeaformis (lake whitefish): 121572004
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Entry
121572004 CDS
T08357
Name
(RefSeq) semaphorin-6D-like
KO
K06842
semaphorin 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
121572004
NCBI-ProteinID:
XP_041739781
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Position
8:complement(57322565..57447352)
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AA seq
1041 aa
AA seq
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MVPPERTRWRLLLAALTLTSCLLSTSATATPFPKDLEPINVVRWEHSYLYPGFQGLVSDN
ETFRLGLDFQRMLRINHMLYIAARDHVFAVNLTTADDDFVPHLKLTWRSKDVAKCTVRGK
NSDECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTTLEQVGEEVVGQARCPFESGQS
NLGLFAGGDFYSATMTDFLASDAVIYRSLGDDSPVLRTVKYDSKWLREPHFHHAIEYGNY
VYFFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFF
YFDVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKAFNGKFKEQKTSDS
AWTPVPEEQVPKPRPGSCAGDGPASAYKSSTTFPDDTLTFIKSYPLMDEAVPSVNDRPCF
TRTTSRYKLTQIAVDTSAGPSKDRTVVFLGSEDGRVLKVLSSTHPNASFGSQLLEDIDVY
NPSMCNIQGQQDRRILGMELDKDHHALFVAFTSCVIRVPLSRCTEHGACKKSCLSSRDPY
CIWLRTGSCANMAPGFKAGFEQDIEGDHSLHPENCHADVLATTRNQNSAADLAYGVRRLP
DMEKSSPSVHYTLLIACVLVAFFLGAILSGFLVSCYCSHNARRAHRLGKDPEASLHPALS
LRSLAKLNGLLDSQPKEEKLDVSTPKMYSAFIPNGKEHTPGRHRMSLGDPDLNLSQGENL
SGLPTPDSTPELPIKNMKAFRNQWERNQNCNNAKESKAPPGTGFGLGSSRSSSGVTQQVF
PFSHSLTIGQALGHLPEERKIPNDERAQGASASQSSSCYPQTVVDVAALDELLQHIHEVS
ASGSHSITVLTSPCAPLPGSSSHNHGHSQSSFRSQPQIPETESAPYYSSSTLPRDSLNRR
LDVPPDAAAASSAGATPLQQQSIPERSAVTRHHSQRHLMIKMGNGGAVPRQHSFRQGGVG
PPPHQLLTRMNSGGGGGVGGGVGFEAHRPLIPSACLTRQHSYSEPPHLHRAAIVRRTASL
KPQVPPKPLFLPVNEQGKYNY
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggtccctccggaacggacgaggtggcgcctcctgctggcagccctcacactcacttcc
tgtctactgtccacctctgccacggccacacctttccccaaggacctggagccaatcaac
gttgtcagatgggagcactcctacctgtacccagggttccaggggctggtgtcggacaat
gaaacattcagactaggcctggacttccagaggatgctgaggatcaaccacatgctctac
atcgctgccagggaccatgtttttgcagtaaacctgaccacagctgatgacgacttcgtc
ccccatctgaagctgacatggaggtccaaggatgtggccaagtgtaccgtgaggggtaaa
aacagtgatgagtgctacaactatgtcaaagtgctggtaccgcggaacgatgagaccctg
tttgcttgcggcactaatgccttcaaccccacctgccgcaactacaagatgaccaccctg
gagcaggttggcgaagaggtggtgggtcaggcgcgctgtcccttcgagtcgggccaatcc
aacctcggcctctttgctggcggtgatttctactctgccaccatgaccgatttcttggcc
agcgacgctgtcatctaccgtagtcttggcgacgacagccccgtcctgcggactgtcaag
tacgactccaagtggctccgagagccccatttccaccatgcgatcgagtatgggaattat
gtgtacttcttcctcagtgagattgcagtggagtacaccaccctgggcaaggtggtgttc
tctcgcgtggcgcgggtgtgtaagaacgacaacggcggctctcctcgggtgctggagcgc
tactggacttccttcctgaaggcgcggctcaactgctcggtgcccggtgactccttcttc
tacttcgatgtgctgcagtcgcttaccaacgtgctacaaatcaaccagcgccccgcggtg
gtgggagtgttcactacgcaagctaacagtatccctggctcagccgtgtgtgccttctac
atggacgacatcgagaaggccttcaatgggaagtttaaggagcagaagaccagtgactca
gcctggaccccggtaccagaagaacaggtgcccaagcccaggcctggttcctgtgccggt
gacggcccggcctctgcctacaagtcgtccaccaccttccccgacgacacgctgaccttc
atcaagtcttaccctctgatggacgaggcggtgccctccgtcaacgaccggccctgcttc
acccgcaccacaagcaggtacaagctgactcagattgcggtggacacctctgccgggccg
tctaaggaccgcactgtggtcttcctgggctcggaggatggcagggtcctgaaggtgttg
tccagcactcatcctaatgcctcctttggctcccagctcctggaggacatagatgtctat
aacccctcaatgtgtaacattcaggggcagcaggaccggaggattctgggaatggagctg
gataaggaccatcatgccttgtttgtggccttcaccagctgtgtcatcagagtaccactc
agccgctgcactgagcacggcgcctgtaaaaagagttgtctgtcctcccgcgacccatac
tgcatctggctccggactgggagctgtgccaacatggcgccagggttcaaggctggcttt
gagcaggacatcgagggagaccactcactgcaccctgagaactgccatgcagatgtactg
gcgaccacgcgaaaccagaactccgcggcagacttagcctacggtgtccgaaggctccct
gacatggagaagtccagccccagcgtccactacactctcctgatcgcctgcgtcctggtg
gccttcttcctcggtgccatcctctccggcttcctggtatcatgctactgcagtcacaac
gcccgccgcgcccaccggcttggcaaggaccctgaggcgtccctccaccccgccctctcg
ctgcgcagcctggccaagctaaacggcctgctggacagtcagcccaaagaggagaagctg
gacgtgtcgacgcccaagatgtacagcgccttcattcccaacgggaaggagcacactccg
ggcaggcacaggatgtccctgggagacccggaccttaacctctcccaaggggagaacctc
tcaggcctacctacccctgactccaccccggagctgcccatcaagaacatgaaagccttc
cggaaccagtgggagaggaaccagaactgcaacaacgccaaggagtccaaggcacccccc
ggcactggcttcggcctgggttcgtcgaggtccagctcgggggtcacccagcaggtgttc
cccttctcccacagcctgaccatcggccaagccctggggcacctgcctgaggagaggaag
atccccaacgacgagcgtgcacagggggcttcagcctcccagtcctcctcctgctacccg
cagacggtggtggacgtggcggccctggacgagctcctccagcacatccacgaggtcagt
gcctcaggcagccacagcatcactgtgctgacctcaccgtgtgcccccctgccgggtagc
tccagccataaccacggtcacagccagagcagcttcagatcccagccccagatccccgag
acggagtcggccccgtactacagttcctccaccctgcccagggacagtctgaaccgccgc
ctggacgtgcccccggacgccgccgccgcctcctcggccggcgccaccccgctgcagcag
cagtccatccccgagcggagcgcagtgactcgccaccactcccagaggcatttaatgatc
aagatgggcaatggaggggccgtcccgcgccagcacagcttcagacagggcggggttggg
ccaccaccccaccagctgctcacccggatgaactcgggaggcggcggtggtgtcggggga
ggggtcggctttgaggcccaccggccgctcatccccagtgcctgcctgacacggcagcac
agctacagcgaaccgccccacctccaccgcgccgccatcgtacgccgcactgcctccctc
aagccccaggtaccccccaagcccctcttcctgcccgtaaatgagcaaggcaagtacaac
tactga
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