Coregonus clupeaformis (lake whitefish): 121572020
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Entry
121572020 CDS
T08357
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121572020
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121572020
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
121572020
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
121572020
BRITE hierarchy
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
TC1
Remorin_C
Motif
Other DBs
NCBI-GeneID:
121572020
NCBI-ProteinID:
XP_041739794
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Position
8:complement(57795457..57806367)
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AA seq
435 aa
AA seq
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MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQHGHYSTAEVLLRA
GVSRDARTKVDRTPLHMAASEGHTLIVDLLVRSGADINAKDMLKMTALHWATQNGHQRVA
ETLIKHGADVHALSKFDKTPFDIAGDIQNADLMLLLQEGMQNQVNMNAEAGMTGSSAQPQ
FIIQGIPGLQGGVVNLADLLNNAAKANSGRLQGGVVNLADLLNNINSAGESEEAIAANSL
DPGSIQHMVNEQGQRVITIVTDQHGNLQTGGLGQPFFVTMQHGQQMLAMPANQVTEEVVE
EEPQPPPARKRKLEASANHMESGDTEQLQRQLQEANRKAQEYRQQLMCKEQEAEQYRMKL
EAMSHSHTNGTSEQEEVVGGEEEEEEVEEVQVETSGSEEVMLQEGAIIIKTEELDSAEEQ
VTLVDSAPSHTEVIS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggtggatttggggaagcggctacttgaggccgcacggaaaggccaggacgat
gaagtcaggacgctaatggccaacggggctcccttcaccacagactggctgggtacatct
ccgttgcacttggccgcccaacacggacactattccaccgccgaggtgctgctcagggca
ggcgtcagcagggacgcccgaaccaaagtggacaggacccctctgcatatggccgcttca
gagggccacaccctcatcgtggatctattagtcaggagtggagcagacattaatgccaaa
gacatgctgaagatgacggctctccactgggccacccagaacggccaccaaagggtagca
gagacgctcatcaaacatggcgccgacgttcacgctctcagtaaattcgataagactcca
ttcgacatcgcaggagacatccagaatgcagaccttatgctcctactacaggagggaatg
cagaaccaggtgaacatgaacgcagaggctggcatgactgggagctcggcccagcctcag
tttatcatccagggcatcccagggctacaggggggcgtggtgaacctggcggacctcctc
aacaatgctgccaaggccaactcgggtaggctccaggggggcgtggtcaacctggccgac
ctcctcaacaacatcaactctgcaggtgaatctgaggaagccatagcagccaattctttg
gaccccggcagcatccagcacatggtgaacgagcaaggtcaaagggtcatcaccatagtg
accgaccaacacggcaacctgcagactggagggcttggtcagccattctttgtcacaatg
cagcatggacaacagatgttggcgatgccagccaatcaggtgacagaggaggtggttgaa
gaggaaccccagcccccgcccgcccgcaagaggaaactggaggcctctgctaatcacatg
gagtctggagacacggagcagttacagaggcagctgcaggaggccaacaggaaggcccag
gagtaccggcagcagctgatgtgcaaggagcaggaagcagagcagtaccgcatgaagctg
gaggcaatgtcgcacagccataccaacggcacctcagagcaggaggaggtggttgggggt
gaggaggaggaggaggaggtggaggaggtgcaggtggagacgtcgggcagcgaggaggtg
atgctccaggagggagccatcatcatcaagacggaggagctggactcggccgaggagcag
gtgacgctggtggactcagcgccctcccacacagaggtaatctcataa
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