Coregonus clupeaformis (lake whitefish): 121572034
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Entry
121572034 CDS
T08357
Name
(RefSeq) homeobox protein Hox-A3a-like
KO
K09303
homeobox protein HoxA/B/D3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121572034
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121572034
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
121572034
NCBI-ProteinID:
XP_041739825
LinkDB
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Position
8:complement(40847327..40886308)
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AA seq
426 aa
AA seq
DB search
MQKATYYDSSAIYSGFPYQSANSFSYDANQVQYPRASHVESEYHRPACSLQSPDGSVALQ
KPGEIAESCDRSTDNQAAQPPVLTDSNQPQVSVSVPPPHPQSQSPSSLNQNTSNGFSQAN
SNGSVHGSPTSTTRKHIFPWMKESRQNQKPKTNSSSSVESCPGDKSPPGGSAASKRARTA
YTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGCGMMP
SPGGQSPRSPLGPSPSSGGGGYLNSMHSLVNSVPYESQSPTSYNKPPHNAYGMPTSYPPP
LNSSLNSSLNNCPPSQKRYPGTSGSPTPEYDAHPLQGNGGYVAHLQQGSPVYVSGGYIDS
MPNNGASVFGLTHLSHPPSTHMDYNGAITMGNSHHHGVCDPNPTYTDLNPHYSQGRIQEA
PKLTHL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaggcaacctactacgacagctccgcaatttacagtggcttcccgtatcaaagc
gcaaatagcttcagttatgacgccaatcaggtccaatatccccgggcctctcatgtggaa
agtgagtaccatcgacccgcctgctccctgcagtccccagacggctcggtcgcactgcag
aagccgggggagatagcagagagctgcgataggagtacggacaaccaggcggcgcagcca
cccgtcctcaccgacagcaatcaaccacaggtctcggtgtctgtcccgccaccccatccc
cagtcacagtcccccagttctctcaaccagaacacaagcaacggcttcagtcaagccaac
tcaaatggctcggtacatggctcgcctacctccaccacccggaagcacatcttcccatgg
atgaaagagtcccgtcagaaccagaagcctaaaaccaatagctccagctcagttgagagt
tgccctggagacaagagccccccgggtgggtcagccgcgtcgaagagagcccggacggct
tataccagcgcacaacttgtggaactggagaaggagttccacttcaaccgttacctctgc
agaccccgcagggtcgagatggctaacctgctcaacctcacggagaggcagattaagatc
tggttccagaaccgcaggatgaagtacaaaaaggatcagaaagggtgcggcatgatgccc
tctcccgggggacagtcccctcggagccccctcggtccatctcccagtagcgggggtgga
ggatacctcaactctatgcattctctggttaacagtgtcccctatgagtcccagtcgcca
acgtcttacaataagccccctcataatgcatacggtatgcccacgtcatatccccctccc
ttgaacagctccctaaacagctccctaaacaactgcccaccctctcagaagaggtatccc
gggactagcggctcgcccacgcccgagtatgacgcgcatcctctccaaggcaatggcggc
tatgtggcgcacttgcagcagggcagccctgtatatgtaagcggaggctacatcgattcg
atgcccaacaacggggcttccgttttcggcctgacccatctctcgcacccgccgtccaca
cacatggactacaatggagcaatcactatgggcaatagtcaccatcacggagtgtgtgat
ccaaacccgacgtacacagaccttaatccgcactactctcagggaagaattcaggaagcg
cccaaacttacgcatctgtag
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