Coregonus clupeaformis (lake whitefish): 121572053
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Entry
121572053 CDS
T08357
Name
(RefSeq) transformer-2 protein homolog alpha
KO
K12897
transformer-2 protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121572053
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121572053
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121572053
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121572053
Spliceosome [BR:
cclu03041
]
Common components
Common spliceosomal components
SR proteins
121572053
BRITE hierarchy
Motif
Pfam:
RRM_1
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
121572053
NCBI-ProteinID:
XP_041739853
LinkDB
All DBs
Position
8:41372331..41379347
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AA seq
315 aa
AA seq
DB search
MSDIEDGNFDGRDSRSPSKSDRGSPVRVKSESRSGSPSPSRVAKHSASRSRSKSRSHSRR
HSNRRYSRSRSPSNRKKSRSYSPEYRKKTSQSASPNRRRPSSRSHDFRKETFSQGAGGGG
EDARVNPDPNQCLGVFGLSLYTTEKDLREVFGRYGPLAGVNVVYDQRTGRSRGFAFVYFE
RIADSKEAMERANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTQNGGGGERNSGSSSG
GGRRGRDSYDRYDDRRGGGYDRGYDRGYDRGDRGGDRGYDRYDEYDKYSRRRSPSPYYSR
YRSRSRSRSYSPRRY
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacattgaggatggaaactttgatggacgagactctcgctccccatccaaatcg
gaccgtggcagtcccgttcgggtcaagtcggagagcaggtccggctccccgagcccatcc
cgggtcgccaaacactcagcgtctcggtcccgctcaaagtccagatctcactctcgtagg
cactctaaccgccggtacagccgctctcgctccccctccaaccggaagaagtcccgctcc
tacagcccagaatatcggaagaagacgagccagagtgcgtcgcccaaccgccgccgcccc
agcagcaggagccatgacttcagaaaagagacattcagtcagggagcaggaggaggtggt
gaggatgccagggttaaccctgaccccaaccagtgtctgggggtgtttgggctgagcttg
tacaccacggagaaggacctgagggaggtgtttggccggtacggcccattggccggggtt
aatgtggtgtacgaccagcgcaccgggcgctcccgtggcttcgccttcgtctacttcgag
aggatcgccgattccaaggaggcgatggagcgtgccaacggtatggagctggacgggaga
cgtatcagagtggacttctctatcaccaagagggcccacacccctacgcctggcatctat
atgggccgacccacacaaaatggtggtggtggggagcgaaacagtggcagcagcagtggt
ggagggaggaggggacgggactcgtatgaccgctacgatgatcgacgcggcggcggttac
gaccgtggatatgaccgtggatacgatcggggagaccgaggtggagaccggggatatgac
agatatgacgagtacgacaagtacagtcgcaggcgctctccctcaccctactacagtcga
tacagatcacgctccaggtctcgctcatacagtccacgacgatactaa
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