Coregonus clupeaformis (lake whitefish): 121572054
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Entry
121572054 CDS
T08357
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 3 isoform X1
KO
K13197
insulin-like growth factor 2 mRNA-binding protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121572054
03041 Spliceosome [BR:
cclu03041
]
121572054
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121572054
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121572054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
RRM_1
KH_DEAH11
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
121572054
NCBI-ProteinID:
XP_041739855
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Position
8:41390337..41421490
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AA seq
626 aa
AA seq
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MNKLYIGNVSEEASAEDLETIFEQWKIPHSSPFLVKTGYAFVDCPDEKIAMMAIDILSGK
VELHGKLLEVEHSVPKRQRSCKLQIRNIPPHLQWEVLDGMLAQYGTVENCEQVNTDTDTA
VVNVRYGAKDQARQAMEKLNGFLMENFALKVSYIPDETAAAAATPPLGGGKRVSVPRGPT
RSGSPGLGARPKLQSDVPLRILVPTQFVGAIIGKEGATIRNVTKQTHSKIDIHRKENAGA
AEKPITVHSTPEGCSNACRTIMEIMQKEALDTKFTEEIPLKILAHNNFVGRLIGKEGRNL
KKIEVDTETKITISPLQDLTLYNLERTITVKGSIEACSRAEEEVMKKVRESYENDVAAMN
LQSNLIPGLNLNALGLFPGGAPGMGPSMGHNAPPPGAQGGYSSFGSSSFGGEGPLWASVL
SASSQPLSGQGQPESETVHLFIPALAVGAIIGKQGQHIKQLSRYAGASIKISADEVSVVD
ANQVAPPEGMDTKQRMVIIAGPPEAQFKAQGRIFGKLKEENFFGPKEEVKLEAHIKVPSF
AAGRVIGKGGKTVNELQNLTSAEVVVPRDQTPDENDQVIVKITGHFYASQLAQRKIQEIL
SQVRRQQQPKPSPRGEGPPLARPSRK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaataagctgtacattggaaacgtgagcgaagaggcgagtgccgaggacttggaaact
atctttgagcagtggaagattccgcacagtagtccgtttctcgtcaaaactggttatgcg
tttgtggattgccccgatgaaaagattgcaatgatggccatcgacattctttcaggtaaa
gttgaactacatggaaaactcctagaagtggagcactcggtccctaaacgtcaaaggagc
tgtaagctgcagatcaggaacatcccgcctcatctgcagtgggaggttctggatggcatg
ttggcccagtatggcacagtggagaactgcgagcaagtaaatacagacacagacaccgca
gtggtcaacgtccgatacggtgccaaggaccaggccagacaggcgatggagaagctgaat
ggcttcctgatggagaactttgccctgaaggtgtcgtacatccccgacgagacggcggcg
gctgctgccaccccgcccctgggagggggtaaaagggtctcggtcccccgtggccctacc
cgctcgggttccccaggcctgggggcgcgccccaaactgcagtcggacgtccctttgcgc
atactcgtccccacacagtttgtaggagccatcatcggcaaggagggagccacgattcgc
aatgtcaccaaacagacacactcaaagatcgacatccacaggaaggagaatgctggagcg
gcagagaagcccatcacggtccactccaccccagagggctgctccaacgcctgcagaacc
atcatggagatcatgcagaaggaggccctcgacaccaagtttactgaggagattccgctg
aagattctggctcacaacaactttgtgggccgactgatcgggaaggaaggacggaaccta
aaaaagattgaagtggacacagagaccaagatcaccatctcccctctccaggacctaacg
ctgtacaaccttgagaggacgatcacagtgaagggttccatcgaggcgtgctcccgcgcc
gaggaggaagtcatgaagaaggtcagggagtcgtatgagaacgacgtggccgctatgaac
ctccagtctaacctgattccaggactcaacctgaatgccttgggtttgttccctggtggt
gctccaggtatgggcccctccatgggacacaacgccccacctcctggtgcccagggtggc
tactcctcattcgggagcagttccttcgggggcgaagggccattgtgggcgtctgtgctg
tcggcgagcagccagcccctctctggccaggggcagccggagtcggagacggtccatctg
ttcatcccggcgctggcggtcggagcaatcatcggaaaacagggtcaacacatcaagcag
ctgtcacgctacgccggagcatccatcaagatcagtgcagatgaagtcagcgtcgtagat
gcaaaccaggtagcccctccagaaggcatggacaccaagcagaggatggtgatcatcgct
ggaccaccagaggcccagttcaaggctcagggtcgtatctttgggaagctaaaggaggag
aacttctttgggccgaaggaggaggtgaaactagaggctcacatcaaggtgccctccttc
gctgctggacgtgtcataggcaagggaggcaaaacggtgaatgagctgcagaacctgacc
agtgctgaggtagtggtccccagagaccagacgcctgatgagaatgaccaggtcatcgtc
aaaatcactggacacttctatgcaagccagctggcccagaggaagatccaggagatattg
tcccaggtgagacggcaacaacagcccaaaccctcgccccgcggggaggggccgcccctc
gcccgcccctcccggaagtag
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