Coregonus clupeaformis (lake whitefish): 121572062
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Entry
121572062 CDS
T08357
Name
(RefSeq) ras-related protein Rab-5A-like
KO
K07887
Ras-related protein Rab-5A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
cclu04144
Endocytosis
cclu04145
Phagosome
cclu04148
Efferocytosis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121572062
04145 Phagosome
121572062
04137 Mitophagy - animal
121572062
04148 Efferocytosis
121572062
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121572062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121572062
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121572062
04031 GTP-binding proteins [BR:
cclu04031
]
121572062
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
121572062
Endosome - Lysosome transport
121572062
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121572062
Exosomal proteins of other body fluids (saliva and urine)
121572062
Exosomal proteins of colorectal cancer cells
121572062
Exosomal proteins of bladder cancer cells
121572062
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
121572062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_16
MCR_beta
TAGT
Motif
Other DBs
NCBI-GeneID:
121572062
NCBI-ProteinID:
XP_041739870
LinkDB
All DBs
Position
8:41873711..41877235
Genome browser
AA seq
216 aa
AA seq
DB search
MANRGGATRPNGSNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARARNWVKELQ
RQASPNIVIALSGNKADLASKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
RLPKSEPAAASVNSGRNRGVDLTEAAQPTKAPCCST
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaggggaggagctacaagacccaacgggtctaacgctggtaacaagatctgc
cagttcaagctagtgcttctgggggagtcggcggtgggcaagtccagcctggtgctccgc
ttcgtcaagggccagttccacgagttccaggagagcaccataggagcggccttcctgacc
cagacagtgtgtctagatgacacgacggtgaagtttgagatctgggacacggctggacag
gagcgctaccacagcctggcgcccatgtactacagaggggcgcaggccgccattgtggtc
tacgacatcacaaatgaggagtcatttgcgcgggccaggaactgggtgaaggagctgcag
agacaagccagccccaacattgtcatcgctctgtcaggcaacaaggctgacctagccagc
aagagagccgtggacttccaggatgcccagtcatatgcagacgacaacagcttgctcttc
atggagacgtcggccaagacgtctatgaatgtgaacgagatattcatggctattgcgaaa
agattgcccaagagcgagcccgcggccgccagcgttaacagcgggcgtaacaggggcgtc
gacctaacggaagccgcccagccaaccaaggccccctgctgcagtacctaa
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