Coregonus clupeaformis (lake whitefish): 121572074
Help
Entry
121572074 CDS
T08357
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121572074 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121572074 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121572074 (vps28)
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
121572074 (vps28)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121572074 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
121572074 (vps28)
Exosomal proteins of colorectal cancer cells
121572074 (vps28)
Exosomal proteins of bladder cancer cells
121572074 (vps28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
ARM_LIN
Motif
Other DBs
NCBI-GeneID:
121572074
NCBI-ProteinID:
XP_041739889
LinkDB
All DBs
Position
8:complement(42490341..42495039)
Genome browser
AA seq
223 aa
AA seq
DB search
MFHGVAVTGGMGGAPANKPELYEEVKLYKNAREREKFDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTAACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLKELIETMNRMSNMPPDNEAKDK
VSLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacggagtagctgtcacgggaggtatgggaggggctcctgccaataaacctgaa
ttgtatgaggaagtaaaattgtacaagaatgcaagagaaagagagaagtttgacaacatg
gcagagctgtttgctgtggtgaagacacttcaggccctggagaaagcttacatcaaagac
tgtgtgacccctaatgagtacacggctgcttgctccaggctactggtgcaatacaaggct
gctttcaaacaggtccagggatctgacgtgggttctatcgatgacttttgcaggaagtac
agacttgactgtccgctagctatggagcgaatcaaggaggatcgaccaatcaccatcaag
gatgacaagggcaacctgaatcgctgcattgcagatattgtatcgctctttatcactgtg
atggacaagctacgtctggagatccgggccatggatgagatccaaccagacctgaaagag
ctaattgagaccatgaacagaatgagcaacatgcccccagacaatgaggccaaggacaaa
gtcagcctctggttgaccactctcagcagcatgtcagcctctgatgagctggacgactcc
caggttcgccagatgctgtttgacctggagtcagcctacaatgccttcaaccgcttctta
cactcctcctaa
DBGET
integrated database retrieval system
