Coregonus clupeaformis (lake whitefish): 121572083
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Entry
121572083 CDS
T08357
Name
(RefSeq) protein argonaute-2 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121572083
03036 Chromosome and associated proteins [BR:
cclu03036
]
121572083
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121572083
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121572083
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121572083
microRNA pathway
RISC loading complex
121572083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoMid
PAZ
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
121572083
NCBI-ProteinID:
XP_041739902
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Position
8:complement(42690595..42718326)
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AA seq
888 aa
AA seq
DB search
MYSSGAAGAAEMLEPPRSSGSIGSDPSDPDPPSPPVPEYVFKPPSRPDFGTMGRTIKLQA
NFFEMEIPKLEVYHYDIDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVYDGRKNLYT
AMPLPIGREKVELEVTIPGEGKDRSFKVAIKWVSCVSLQALQEALSGRLPNIPFETIQAL
DVVMRHLPSMRYTPVGRSFFTPSEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSAT
AFYKAQPVIEFMCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGNHSLPGLKVEITHCGQMK
RKYRVCNVTRRPASHQTFPLQQENGQTIECTVAQYFKDKYKLMLRYPHLPCLQVGQEQKH
TYLPLEVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRSANFNNDPYVRE
FGVMVRDEMTEVNGRVLQAPSILYGGRQNKAIATPIQGVWDMRNKQFHTGIEIKVWAIAC
FAPQRQCTELLLKAFTDQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFKHLKYTYQGL
QLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQVKNVQKTTPQTLSNLCLKINVKLGGVN
NILLPQGRPLVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQQHR
QDIIQDLATMVRELLIQFYKSTRFKPTRIIYYRDGISEGQFNQVRLEVLQHELLAIREAC
IKLEKDYQPGITFVVVQKRHHTRLFCMDRNERVGKSGNIPAGTTVDTKITHPSEFDFYLC
SHAGIQGTSRPSHYHVLWDDNHFTSDELQVLTYQLCHTYVRCTRSVSIPAPAYYAHLVAF
RARYHLVDKEHDSAEGSHTSGQSNGRDQQALAKAVQIHQDTLRTMYFA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtattccagtggagcagctggagctgctgagatgcttgaaccacctcgctcctcaggg
tcaattggctctgacccctctgatccagatcccccgtctcccccagtgccggagtatgtg
ttcaaacccccatcacggccagactttggcaccatgggcaggacaatcaaactgcaggcc
aacttctttgagatggagatccccaaactggaggtctaccactacgacatcgacatcaag
ccagaaaaatgccccagaagggtcaaccgtgaaattgtggagcacatggtacagcacttt
aaaacgcagatttttggggatcgaaagccagtgtatgacgggaggaagaatctctacaca
gccatgcccttaccaatagggagggaaaaagtggagctggaggtgaccatcccaggcgag
gggaaggacaggagcttcaaagtggccataaagtgggtgtcctgcgtcagtctgcaagct
cttcaagaagccctttcgggacgactgccaaacatccccttcgagaccatccaggccctg
gacgtggtcatgagacatttgccctctatgaggtacacccccgtcggacgttctttcttc
accccttcagagggctgctctaaccccctgggcgggggcagagaggtctggtttgggttc
caccaatcggtcaggccttccctgtggaagatgatgctaaacattgacgtgtctgccact
gctttctacaaggctcagcctgtgattgagttcatgtgtgaggttttggatttcaaaagc
attgaagaacaacagaagcccttaaccgactcccagagagtaaagtttaccaaggaaatc
aaaggtaatcattcattaccaggtctgaaggttgagatcactcactgtggtcagatgaaa
aggaagtacagagtatgtaacgtgaccagaagaccagccagccaccagacgtttcctctg
cagcaggaaaatggccagaccatagaatgcacggtagcgcagtacttcaaagacaagtac
aaactcatgctacgctacccccacctcccctgtctacaggtcggacaggagcagaaacac
acctacctccccctcgaggtatgcaacatagtagctggccagcggtgcatcaagaagctg
acagacaatcagacgtcgactatgatccgtgccacagcccgatcagcacccgaccgtcag
gaagaaatcagcaaactgatgagaagtgccaactttaacaatgatccttacgtgcgtgag
tttggggtgatggtgagggatgagatgaccgaggtgaatggccgagtcctccaggcccca
tctatcctctacggagggcggcagaataaagcaatagcaactcccatccagggagtgtgg
gacatgaggaacaagcagttccacactggcatagagatcaaggtgtgggccatcgcctgc
ttcgccccacagagacagtgcaccgaactcctgctcaaggcgtttacagaccagctgcgt
aagatctctcgtgacgcggggatgcccatccagggccaaccctgtttctgtaagtacgcc
cagggtgcggacagcgtggagcccatgttcaaacacctcaagtacacctaccagggcttg
cagctggtggtggtcatcctgcctgggaagacgcccgtctatgctgaggtgaagcgtgtt
ggtgacacagtgctgggcatggccacccagtgtgtccaggtgaagaatgttcagaagacc
actccccaaaccctctccaacctctgcctgaagatcaacgtcaagttgggcggggtcaac
aacatcctcctcccacagggcaggcccctggtgttccagcagccggtcatcttcctgggt
gctgacgtcactcaccctcctgctggagacgggaagaaaccctccatcgctgcagtggtg
gggagcatggacgcccaccccagccgctactgtgccacggtgcgggtgcagcagcatcgc
caggacatcatccaggacctggccaccatggtcagagagctgctcatccagttctacaag
tccacccgcttcaagcccacccgaatcatctactaccgcgacggcatatctgagggccag
ttcaaccaggttagacttgaggtgctccaacatgagttactggcgatccgtgaggcctgc
atcaaactggagaaagactaccagcccggtatcaccttcgtggtggtgcagaagagacac
cacactcgactgttctgcatggacagaaacgagagggttggtaagagtggcaacatccct
gccggcaccacagtggacaccaaaatcactcacccatcggagtttgacttctacctgtgt
agccacgctggcattcaggggaccagccgaccatcccactaccatgtgctgtgggacgac
aaccacttcacctcagacgagctgcaggtgctcacctaccagctgtgccacacctacgtg
cgctgcacccgctccgtctccatcccagcaccagcctactacgcacacctggtggcattc
cgtgcccgctaccacctggtggacaaggagcacgacagtgcggagggcagtcacacgtcg
ggacagagcaatggccgtgaccagcaggccttggccaaggcagttcagatccaccaggac
acactgcgcaccatgtacttcgcctga
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