Coregonus clupeaformis (lake whitefish): 121572084
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Entry
121572084 CDS
T08357
Name
(RefSeq) 26S proteasome complex subunit SEM1
KO
K10881
26 proteasome complex subunit DSS1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03050
Proteasome
cclu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121572084
09124 Replication and repair
03440 Homologous recombination
121572084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121572084
04131 Membrane trafficking [BR:
cclu04131
]
121572084
03051 Proteasome [BR:
cclu03051
]
121572084
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121572084
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
121572084
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
121572084
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
121572084
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121572084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSS1_SEM1
Motif
Other DBs
NCBI-GeneID:
121572084
NCBI-ProteinID:
XP_041739911
LinkDB
All DBs
Position
8:42785721..42791663
Genome browser
AA seq
70 aa
AA seq
DB search
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGSKMETS
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaagaaacagactgtggatttgggattattagaggaggacgatgagtttgaa
gaattcccagccgaggattggacgggtctggatgaggatgaagatgcccacgtgtgggaa
gacaactgggacgatgacaacgtagaggacgacttctctaatcaactcagagcggagctg
gagaaacatggttccaagatggagacgtcgtag
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