Coregonus clupeaformis (lake whitefish): 121572090
Help
Entry
121572090 CDS
T08357
Name
(RefSeq) epsilon-sarcoglycan isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121572090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
Motif
Other DBs
NCBI-GeneID:
121572090
NCBI-ProteinID:
XP_041739925
LinkDB
All DBs
Position
8:43214108..43250592
Genome browser
AA seq
439 aa
AA seq
DB search
MDTTVVLIWLSMVVTILSRLHADRNVYPSAGVLFVHVLEREYFKGEFPPYPKPGDSSNDP
ITFNTNLMGYPDRPGWLRYIQRTPHSDGVLYGSPTAEHMGKATIIEITAYNRRTFETARH
NLVINIMSTEEYPLPYQAEFYIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSA
LDRGGRVPLPINNLKEGVYVMVGADVQFSSCLREVENPHNQLRCSQEMEPVISCDKKFRA
QFDIDWCKINLVDITKVIMIHSNRPDPGTGVLPDIGEYNPPPESLKSRDFFADFLITLAV
PSAVAMVLFSVLGYSMCCRREGVDKRNMQTADIQLVHHSSIQKSTKELRSMSKNREISWP
LSTLPVFSQSGEVVPPIHPDNYETTSMPLMQTQTNLQNQIQIPQQQPSGDRDNYCMSTFR
RLEVNGIPEERKVAEAVNL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggacacaacggttgttctcatatggctttctatggtggtcaccatcctgtcgaggttg
cacgccgaccggaacgtttacccgtctgcaggcgtgctgtttgtccacgtcctggagaga
gagtacttcaaaggagagtttcccccctatcccaaacctggggattccagcaacgacccc
atcaccttcaacaccaacctgatgggctacccagaccggccaggctggctgcgctacatc
cagaggaccccacacagcgatggggtgctctacggatcccccactgcagaacacatgggc
aaggcaaccatcatagagattactgcctataacaggcgcactttcgaaacggcccggcac
aacttggtcataaacatcatgtccacggaagagtacccactgccgtaccaggcagagttc
tacataaagaacatgaatgtggaggagatgttggcaagcgaggttctgggagactttctg
ggggcagtgaagaacgtgtggcagcccgaacgcctcaacgccatcaacatcacctcagcc
ctggacaggggcggacgcgttcccctgcccataaacaacctcaaagagggtgtgtatgtg
atggtgggggcagacgtccagttctcttcctgcctgcgggaggtggagaacccccacaac
cagctccgctgcagccaggagatggagcctgtcatcagctgtgacaagaagttcagagcc
cagttcgacatcgactggtgcaagatcaatctggtggacatcaccaaggtgatcatgatc
cacagtaaccgtccagacccagggacgggggttctgcctgacatcggggagtacaacccc
ccaccagagtctctgaagagcagggacttctttgctgacttcctcatcacgttggcggtg
ccctcggccgtggccatggtcctcttcagcgtcctaggttattccatgtgctgccggcgg
gaaggggtggataaaagaaacatgcaaacagcagatatccagttagtgcatcacagctcc
atccagaagtcgaccaaggagctgcggagcatgtctaaaaacagggagatctcctggccc
ctctccaccctgcctgtcttcagccaaagtggggaggtggtgccccccatacacccagac
aactacgagacaaccagcatgcccctgatgcagacacagacaaacctgcagaaccagatt
cagataccacagcaacagccatcaggagatagagataattattgtatgtcgacatttcgg
agactggaggtaaatggtattcctgaggagaggaaagtggctgaagctgtgaatttgtga
DBGET
integrated database retrieval system