Coregonus clupeaformis (lake whitefish): 121572094 Help Entry 121572094         CDS       T08357                                  Symbol vps50 Name (RefSeq) syndetin isoform X2   KO K23288   syndetin Organism cclu  Coregonus clupeaformis (lake whitefish) Brite KEGG Orthology (KO) [BR:cclu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cclu04131]     121572094 (vps50) Membrane trafficking [BR:cclu04131]  Protein recycling   Others    EARP complex     121572094 (vps50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps54_N Syndetin_C Motif Other DBs NCBI-GeneID:  121572094 NCBI-ProteinID:  XP_041739934 LinkDB All DBs Position 8:complement(43682635..43910398) Genome browser AA seq 1005 aa AA seqDB search MQKIKSLMARQGLKSPQESMADLSPVENFRIPSKEELREMREQPIDPQAEQEIINSIQEV YYSNDSFDMVQHELEKLPPELNLLELEEYRDKLKRQQAAVSKKVADLILEKQPSYVKELE RVTSLQTNLQLAAVICTNARRQLSISKEDFTEASLGLLANQRRRQLLTGLLKSLRTIKTL QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA LSKTCKHFDISHYTRVQLAYTLLEKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA DTKFQKMQYKDLCTHITPDSYVPCLSDLCKALWEVMLSYHRTMQWHEEQDKEEAAPTTDE VGAADTEEAVVDHSYVKKKLEHGLTRIWQEVQLKVKAYLLGTDMSNFKYDDFIVVLDVIS RLMQVGEEFCGSKSELLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFNI AQLHEFKFMGQSRSPSVSPSRQVLSSQDQVLSSQDQEVLSLFQHFSQEGNPFERHIDNKD EETEDVLASNGYESDELEKCVYQDYDSDSDVPDELKQDYVDEQTGDVPLKSASRETLRSR KKSDYSLNKGSNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVY AFFGRNDMPAPSLCVPGGQGGQGGREAGPARPVAPFCWYESSGPGLISSRLRTTLNRIQE SLIQMESLGEGGSSVHGGPVEERKEKVPSPHLSQLVVLTASETLYGLAQRVVATESLVFL AEQFEFLQSHLDTMMPAAKKPFLQQFYSQTVSTASELRKPIYWVVAAKALDYEQMLLLMA GVKWDIREIMSQHNVYVDVLLKEFEEFNKRLGDVSRHVRVPLPVSNVLWEHCIRLANRTL VEGYGNVKKCSNEGRALMQLDFQQFLMKLEKLTDMRPIPDKDFVETYIKAYYLTENDMEQ FIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAIDDIDRPKR NT seq 3018 nt NT seq  +upstreamnt  +downstreamnt atgcagaagataaagtcacttatggcccggcagggcctgaaaagcccacaggagagcatg gcagacctcagcccagtggagaacttcaggatcccaagcaaggaggagttgagggagatg agggagcagcccatcgacccccaggcggagcaggagatcattaacagcatccaggaggtc tactattccaacgactccttcgacatggtgcagcacgagctggagaaactcccacctgag ctgaacctgctggagctggaggagtacagagacaagctgaagagacaacaagcagcggtt tccaaaaaggtcgccgatcttatcctggaaaaacagccgtcctacgtcaaggagctggag cgggtgacgtccttacaaaccaatctacagctggctgcagtgatctgcaccaacgctagg aggcagctgagtatttcaaaggaggacttcacagaggccagcctggggctcctagccaat cagaggaggagacagctgctcacagggctgctgaagtcactgaggaccatcaagaccctg caaaggactgatgttagactcagtgagatgctggaggaggaggactatccaggtgccatc cagttgtgtctggaatgtcagaaggctgccagcacattcaaacactacagctgcataagt gagttgaattccaagcttcaagacactctggagcagatcgaggagcagctggatgtggcc ctgtctaaaacctgcaagcactttgacatctcccactacaccagagttcagctggcgtac accctcctggaaaagacgcagacggccatggaccagctccacatgcactttacccaggcc atccacaacactgtgttccaggtggtactgggatacgtggagctctgcgccggcaacgcc gacaccaagttccagaagatgcagtacaaggacctctgcacgcacatcactccagacagc tacgtcccctgcctgagcgacctgtgcaaggcattgtgggaggtgatgctcagctaccac cggaccatgcagtggcacgaggagcaagacaaggaggaggccgcacccaccacagatgag gtgggtgctgcagacactgaggaggcggttgtggaccacagctatgtgaagaagaagctg gagcatggactcactcgaatctggcaggaagtccagctgaaagtgaaagcctatctgctt ggtacagacatgtccaacttcaaatacgacgacttcatcgtggtcctggatgttatcagc aggctgatgcaagtgggggaggagttctgcggcagtaagtcagagttgctgcaggagtcc atcaaacgtcagagtgtcaactacttcaagaactatcacaggacgcgcctggaggagttg cggatgtttctggagaacgagacgtgggaactgtgtcctgtcaagtccaacttcaacatt gctcagctccatgagtttaagttcatgggtcagagccggtccccctcagtgtctcccagt agacaggtgttgtccagtcaggaccaggtgttgtccagccaggaccaggaagtcctgtct ctgtttcagcacttcagccaggaggggaaccccttcgagaggcacatcgacaacaaggat gaggagactgaggacgtactggcctccaacgggtatgagtccgatgagctggagaagtgt gtgtaccaggactacgacagtgacagtgacgtccctgatgaactcaaacaggactacgtg gacgagcagactggagatgtccctctcaagagtgcgtcgagggagactctgcgcagcagg aagaagtctgactacagcctaaacaaaggctccaacgctcccatcctgaccaacacaacc ctcaacgtgatccgcctggtcgggaagtacatgcagatgatgaacattctgaaaccaata gcctttgatgtcatccactgtgtttcccagctgtttgattactacctgtatgctgtctac gcattcttcggccgcaacgatatgcctgcccctagcctgtgtgtgcccggcggccagggt ggccaggggggcagggaggctggtccggccaggcctgttgcccctttctgctggtatgaa tcatcaggtccgggtctgatcagcagccgactgagaacaacactgaacagaatccaggag agcctcatccaaatggagtctctgggggaaggcggctccagcgtccacggtggtccagtg gaggagagaaaggagaaggtgcccagcccccacctcagccagcttgtggtcctgacagcc agcgagaccctctacggcctggcccagagggttgtcgccacagagtcactggtgtttctg gccgagcagtttgagttcttgcagtctcacctagacaccatgatgcctgcagccaagaag ccattcctccagcagttctactcacagactgtctccacggccagtgagctacgtaaaccc atatactgggtcgtggcggccaaggctttagactacgaacagatgctgctgctgatggct ggagttaagtgggacattagggagataatgtcgcagcacaacgtgtacgtggacgtcctg ttaaaggagtttgaagagtttaacaagaggctgggtgatgtgtccagacacgtccgggtc cctctgcctgtgtctaatgtcctgtgggaacactgcatccgtctggccaacaggactctg gtggagggctatggtaatgtgaagaagtgcagtaacgaggggcgggccctgatgcagctg gacttccagcagttcctgatgaagctggagaagctgacagacatgaggcccatccctgat aaggactttgtggagacctacatcaaggcctactacctgactgagaatgacatggaacag ttcatcaagaaccacagggagtactccatgaagcagctggccaacctggtaaatgtttgt ctgggttctcacatcaacaagaaggcccggcagaaactcctggcggctatcgacgacatc gacagaccaaagagatag

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