Coregonus clupeaformis (lake whitefish): 121572106
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Entry
121572106 CDS
T08357
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121572106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121572106
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121572106
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121572106
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121572106
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121572106
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PH_21
PH_11
PH_8
PH_17
TcaA_2nd
SirA
Motif
Other DBs
NCBI-GeneID:
121572106
NCBI-ProteinID:
XP_041739958
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Position
8:16087768..16116056
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AA seq
767 aa
AA seq
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MTVKLDFEECLKDSPRFRAAIEVVEGDVCELETRLEKLVKQCHSMLEAGRAYCQTSKSFV
TGLKELGHHCSGDNMMGECLEKFSKKLAVILEAQGEVIETTQKSVKLKLLSFVKEDVRRF
KDVRKEFERDSESLEAALGRNAQAPRGKQHEVEEASHALLNARKTFRSGALDYVLQINVI
EAKKKTDILMAIVSMMEAQSQFFQQGHQSLSELDDYRRTLSEEHTQLVLNSAREKRDMEQ
RHAAIKKKDVSYDNSLMDFCADAPNGIAMEGYLYKRASNAFKTWSRRWFSIQKNQLVYQK
KFKDQPTVVIEDLRLCTVKVCADNERRFCFEVVSPSKSCLLQADSERQQQGWISAVQNSI
ASAFQERREDPHCPRERCSSVSGGSPGGGGLCGEQEKTGGREALEKVQTIPGNMQCCDCG
EPGPDWASINLGITLCIVCSGIHRSLGVHFSKVRSLTLDSWEPELVRLMCELGNTAINRI
YEARIDEITIKKPHPSSPRGDKESWIHSKYVEKTFIQKLPETGHNAPLRRSSARRNRATT
QERPAGSRPPLKPKPNRATLPRLAGLNQSDLVQNNNTGIHKDYEDEEEEDLSGLHPGALL
YRSAALQHFPVMADALAHGADVNWVNTAEGSSTPLLQAVTANSLAACEFLLQNGANVNTA
DSNGRGPLHHATILGHTGLVCLFLKRGADYNARDNTQKDPITIAVETANADIVTLLRIAK
MNKEMREMDGAFGQPGDETYQDIFRDFSHMASNNPEKLKRRSTDYKT
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaaactggactttgaagagtgtctcaaagactccccccgattcagggctgcc
attgaagtggtggaaggagatgtctgtgaattggaaactcgattagagaagctggtgaag
cagtgccactccatgctagaggctggcagggcctattgtcagaccagcaagagctttgtc
acagggctcaaagagctgggccaccactgttctggggacaacatgatgggggagtgtttg
gagaaattctccaagaagctggcagtgattcttgaagctcagggggaagtgattgaaacc
acacagaagtcggtgaagttgaagttgctgagttttgtgaaagaggacgtgcgtcggttc
aaggatgtgcgtaaggagtttgagcgggacagtgagagtctggaggcggcattggggagg
aacgctcaggccccccggggaaaacagcacgaggtggaagaggccagccatgccctcctc
aacgcccgcaagaccttccgctccggagccctcgactacgtactgcagatcaatgtcatc
gaggccaagaagaagaccgacatcctaatggcgattgtgtctatgatggaggcccagtcc
cagttcttccagcaaggtcaccagtccctctcggagctggacgactaccgccgcaccctg
agtgaagagcacactcaactagtgttgaattctgccagggagaagagagacatggaacag
agacatgctgccattaagaaaaaggatgtctcctatgataactccttaatggatttctgt
gctgacgcacccaacggtatcgccatggagggctacctgtataagagagctagcaacgcc
ttcaagacctggagcaggcgctggttctctatccagaaaaatcaactggtctatcagaag
aaattcaaggaccagcccacagtagtgattgaggatctgcgtctttgtacagtgaaggtc
tgcgctgacaacgagagacgattctgcttcgaggtggtctctccatccaagagctgtctg
ttgcaggcagactctgagcgtcagcagcagggctggatcagtgctgtccagaacagcatc
gcttcagccttccaggaacgcagagaagacccacactgtccaagggagcgttgcagctct
gtgtcgggaggcagcccaggaggaggagggctgtgtggggagcaggagaagacggggggc
cgcgaggctttggagaaggtccagaccatcccggggaacatgcagtgttgcgactgtgga
gagcccggtccggactgggcctctatcaacctggggatcaccctctgcatcgtctgctcg
gggatacacaggagtctgggcgtccatttctccaaagtacgctccctcaccctggactcc
tgggaaccagagctggtccggttgatgtgtgagttgggaaacacagccatcaacaggatc
tacgaggcgcgaattgatgagatcaccatcaagaaaccccacccatccagtccaaggggt
gataaggagtcgtggatccattctaagtacgtggagaagacgtttatccagaagctccca
gagacgggacataacgctcccctgcggcgctccagcgcccggaggaacagggctaccacc
caggagaggccagccgggtcacgacccccactcaaacccaaacccaaccgggccaccctg
ccacgactcgcagggctcaaccagagtgaccttgtccaaaacaacaatactggcattcac
aaagattatgaagatgaggaagaggaggacctgtctggtcttcatcccggggcgttgtta
tatcggtctgcagcgctgcagcatttccctgtcatggccgacgccctggcccatggagct
gacgtcaactgggtcaacacagccgaggggtccagcaccccactcctacaggccgtcacc
gcgaactccttggcagcgtgtgagttcctgctacagaacggtgccaatgttaacacagca
gacagtaacgggagaggacctctacaccacgccactatactgggacacactgggcttgtg
tgtctgttcctgaagcgaggggcagactacaacgccagagacaacacccagaaagacccc
attactatcgccgtggagacagccaacgctgacatcgtcaccctgctgcgaattgccaag
atgaacaaggagatgcgtgagatggacggagcctttggccaaccaggtgatgaaacgtac
caggacatcttcagggacttctctcacatggcctctaacaacccggagaaactcaaacgg
cgcagcacagactataagacttga
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