KEGG   Coregonus clupeaformis (lake whitefish): 121572112
Entry
121572112         CDS       T08357                                 
Name
(RefSeq) netrin-3-like isoform X1
  KO
K06843  netrin 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    121572112
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cclu00536]
    121572112
Glycosaminoglycan binding proteins [BR:cclu00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   121572112
SSDB
Motif
Pfam: Laminin_N NTR EGF_laminin EGF_LMN_ATRN F5_F8_type_C Curlin_rpt
Other DBs
NCBI-GeneID: 121572112
NCBI-ProteinID: XP_041739964
LinkDB
Position
Unknown
AA seq 872 aa
MMFLPVSPPPSFSLPFLLLLLTFLPSSLLSRSLSHSPLSWTSPHDPCYHLDGRPRHCLSE
FINAAYGVPVSAAHSLRGPPDQNAVNVSSLTDLHNPYNLTCWTAQVGGPDNGDWVLTLPL
GRRFEVTYISLQFCQQGEPSDPVSISVLKSMDHGRTWRPMQHYSSDCLGRFGLQAQTVAQ
TRHQETEPLCSDPRPLQRHRGGMVLAFSTLDGRPSSPDFDYSPTLQDWVTATDIRVVFHQ
MTQFQQTKLGSSEDRGVGEGLGAGSGVLRWRVGSKNEAVVGQVNGDNNAWGFVEKDMKKT
EKQGRSRGEKMDKSGRRGHNKGSGGQGEDGHNVTRKDLERDTQEMDTSKRGNGKGKGRGR
KREGGHHWSPCQEGGVCDWTIEGQGRDNKRRELRRRRNNNRNSKARANQNLQLAPPSPLI
SAPPVRPPLALSDLQVGGRCKCNGHASRCRHDDTGRAVCVCEHHTAGADCDVCEDFYYDR
PWQRATPSQPHPCVPCECNGHSSKCRFSMEVFQQSGRRSGGVCLKCRHHTAGRHCQYCQN
GYARDHGKLPNHHKACQLCQCHPMGAVGRWCNQTSGQCLCRDGVTGLKCNRCAPGYKQGR
SPLRPCIRIQEVTAPTTPVYQPQYSIDEECVSYCQPSLVKVRMNLETYCLKDFVLKLQVR
GMERSGPWWQFSVWIQTVFRTGSSSRVRRGPQALWVPDRDLGCGCPALQVGRTFLLIGAE
GRGRNWGPEERRLVADRSTLALQWREHWNPKLRGFRGQDKRGRCPPKLPGGVDPHGGHSK
HHHSEYTPPHLVTEKETEVKVHPHTHSHSHKPSDSVKDTEEEAENSVALDTHTQTQSSSH
HRPEPSQSQEQQQEQTPSPSTPSLICSTQTPV
NT seq 2619 nt   +upstreamnt  +downstreamnt
atgatgttcctgcccgtctcccctcccccctccttctccctcccttttctcctacttctc
ctcactttcctcccttcttccctcctttcccgttcactctctcactcccctctgagctgg
acttctccccatgacccctgctaccacctggatgggcgtccgcgacactgcctgtcggaa
ttcatcaatgccgcctacggtgtccctgtcagtgccgcccactccctccgaggacctcct
gaccaaaatgctgttaatgtcagctccctcacggacctccacaacccctacaacctgacc
tgctggacagcccaggtgggaggccccgataatggggactgggttctcaccctccccctg
ggccggcgcttcgaggtcacctacatcagcctgcagttctgccagcagggggagccgtcg
gatccggtctccatctctgtgctcaaatccatggaccacgggcgcacctggaggcccatg
cagcattactccagcgactgcctcgggaggtttgggctccaggcccagacggtggcccag
accagacaccaggagaccgagcctctatgctcagatccccggcctctgcagaggcaccgg
ggtggcatggtgctggccttctccaccctggatggaaggccctcctccccagactttgac
tacagccccaccctgcaggactgggtgacggccacggacatacgggtggtcttccaccag
atgacccagttccagcagaccaagttggggagttcggaggataggggggtgggtgaggga
ttgggagcaggtagtggggttctgaggtggagagtggggtcgaagaatgaagctgtggtg
ggtcaggtgaatggggacaacaacgcttgggggtttgtggagaaggatatgaaaaagaca
gaaaaacaagggaggagcagaggagagaaaatggacaaatccgggcggaggggtcacaat
aaagggtcggggggtcagggagaggacggacacaatgtgacccggaaggatttagaacga
gacactcaggaaatggacacctccaagagagggaacggtaaaggaaaagggcgtggccgc
aaaagggaggggggccaccattggagtccgtgccaggaaggcggcgtctgtgattggaca
atcgagggccaggggcgggacaataagaggcgggaactgaggaggaggagaaacaacaat
cggaactccaaagcgagagcgaatcagaatctccagctagctcctccctccccactgatc
tccgccccccctgtcaggccccccctggccctctcggacctgcaggtgggtggcaggtgt
aagtgtaacgggcatgcctcgcggtgtcgtcatgatgacacgggacgggcggtgtgtgtg
tgtgagcaccacacagcgggggcagactgcgacgtatgtgaggacttctactatgacagg
ccctggcaacgagccacgcccagtcagccacacccgtgcgtcccatgtgagtgtaacggc
cactcctctaagtgtcggttcagcatggaggtgttccaacagtcgggccggcgcagcggg
ggggtgtgtctgaagtgtcggcatcatacagcaggacgccactgccagtactgtcagaac
ggatacgcccgcgaccacggcaagctccccaaccaccacaaggcctgccaattgtgtcag
tgtcaccctatgggtgctgtgggtcgctggtgtaaccagacatcaggacagtgtttgtgt
cgggatggggtaacaggactgaagtgcaaccgctgcgcccctggctacaaacaggggcgc
tcccccctccggccctgcatccgaatccaggaggtgacagcccccaccacacctgtgtac
cagccccagtacagcatagatgaagagtgtgtatcgtattgccagccatcgctggttaaa
gtgaggatgaacctggagacgtactgtctaaaggactttgtcctgaagctacaggtcaga
gggatggagcgttcaggcccctggtggcagttctccgtctggatccagaccgtgttccgt
acggggtcttcctcccgtgttcgcaggggccctcaggcactctgggttcccgaccgtgac
ctgggctgcggctgccccgccctccaggtgggccgcaccttcctgctgatcggggccgag
gggcgggggcggaactggggcccagaggagagacggctggtcgccgatagatccacactg
gctctccagtggagggagcactggaaccccaaactgagagggttcagggggcaggacaag
aggggccgctgccccccaaaattgcccgggggtgtcgacccccacgggggccactcaaag
caccatcactcagagtacaccccacctcaccttgtgacagagaaagagacagaggtcaag
gtgcacccacacacacattcacattcacacaaaccctcagattctgtgaaagacacggaa
gaggaggcagagaactctgtggcgctggacacacacactcagacacagtcctcctcacac
cacagacctgaaccatcacaatcccaggaacagcaacaggaacagactccatccccctcc
acacccagtctcatatgttccacccagacccctgtctga

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