Coregonus clupeaformis (lake whitefish): 121572112
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Entry
121572112 CDS
T08357
Name
(RefSeq) netrin-3-like isoform X1
KO
K06843
netrin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121572112
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121572112
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121572112
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
Curlin_rpt
Motif
Other DBs
NCBI-GeneID:
121572112
NCBI-ProteinID:
XP_041739964
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MMFLPVSPPPSFSLPFLLLLLTFLPSSLLSRSLSHSPLSWTSPHDPCYHLDGRPRHCLSE
FINAAYGVPVSAAHSLRGPPDQNAVNVSSLTDLHNPYNLTCWTAQVGGPDNGDWVLTLPL
GRRFEVTYISLQFCQQGEPSDPVSISVLKSMDHGRTWRPMQHYSSDCLGRFGLQAQTVAQ
TRHQETEPLCSDPRPLQRHRGGMVLAFSTLDGRPSSPDFDYSPTLQDWVTATDIRVVFHQ
MTQFQQTKLGSSEDRGVGEGLGAGSGVLRWRVGSKNEAVVGQVNGDNNAWGFVEKDMKKT
EKQGRSRGEKMDKSGRRGHNKGSGGQGEDGHNVTRKDLERDTQEMDTSKRGNGKGKGRGR
KREGGHHWSPCQEGGVCDWTIEGQGRDNKRRELRRRRNNNRNSKARANQNLQLAPPSPLI
SAPPVRPPLALSDLQVGGRCKCNGHASRCRHDDTGRAVCVCEHHTAGADCDVCEDFYYDR
PWQRATPSQPHPCVPCECNGHSSKCRFSMEVFQQSGRRSGGVCLKCRHHTAGRHCQYCQN
GYARDHGKLPNHHKACQLCQCHPMGAVGRWCNQTSGQCLCRDGVTGLKCNRCAPGYKQGR
SPLRPCIRIQEVTAPTTPVYQPQYSIDEECVSYCQPSLVKVRMNLETYCLKDFVLKLQVR
GMERSGPWWQFSVWIQTVFRTGSSSRVRRGPQALWVPDRDLGCGCPALQVGRTFLLIGAE
GRGRNWGPEERRLVADRSTLALQWREHWNPKLRGFRGQDKRGRCPPKLPGGVDPHGGHSK
HHHSEYTPPHLVTEKETEVKVHPHTHSHSHKPSDSVKDTEEEAENSVALDTHTQTQSSSH
HRPEPSQSQEQQQEQTPSPSTPSLICSTQTPV
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcctgcccgtctcccctcccccctccttctccctcccttttctcctacttctc
ctcactttcctcccttcttccctcctttcccgttcactctctcactcccctctgagctgg
acttctccccatgacccctgctaccacctggatgggcgtccgcgacactgcctgtcggaa
ttcatcaatgccgcctacggtgtccctgtcagtgccgcccactccctccgaggacctcct
gaccaaaatgctgttaatgtcagctccctcacggacctccacaacccctacaacctgacc
tgctggacagcccaggtgggaggccccgataatggggactgggttctcaccctccccctg
ggccggcgcttcgaggtcacctacatcagcctgcagttctgccagcagggggagccgtcg
gatccggtctccatctctgtgctcaaatccatggaccacgggcgcacctggaggcccatg
cagcattactccagcgactgcctcgggaggtttgggctccaggcccagacggtggcccag
accagacaccaggagaccgagcctctatgctcagatccccggcctctgcagaggcaccgg
ggtggcatggtgctggccttctccaccctggatggaaggccctcctccccagactttgac
tacagccccaccctgcaggactgggtgacggccacggacatacgggtggtcttccaccag
atgacccagttccagcagaccaagttggggagttcggaggataggggggtgggtgaggga
ttgggagcaggtagtggggttctgaggtggagagtggggtcgaagaatgaagctgtggtg
ggtcaggtgaatggggacaacaacgcttgggggtttgtggagaaggatatgaaaaagaca
gaaaaacaagggaggagcagaggagagaaaatggacaaatccgggcggaggggtcacaat
aaagggtcggggggtcagggagaggacggacacaatgtgacccggaaggatttagaacga
gacactcaggaaatggacacctccaagagagggaacggtaaaggaaaagggcgtggccgc
aaaagggaggggggccaccattggagtccgtgccaggaaggcggcgtctgtgattggaca
atcgagggccaggggcgggacaataagaggcgggaactgaggaggaggagaaacaacaat
cggaactccaaagcgagagcgaatcagaatctccagctagctcctccctccccactgatc
tccgccccccctgtcaggccccccctggccctctcggacctgcaggtgggtggcaggtgt
aagtgtaacgggcatgcctcgcggtgtcgtcatgatgacacgggacgggcggtgtgtgtg
tgtgagcaccacacagcgggggcagactgcgacgtatgtgaggacttctactatgacagg
ccctggcaacgagccacgcccagtcagccacacccgtgcgtcccatgtgagtgtaacggc
cactcctctaagtgtcggttcagcatggaggtgttccaacagtcgggccggcgcagcggg
ggggtgtgtctgaagtgtcggcatcatacagcaggacgccactgccagtactgtcagaac
ggatacgcccgcgaccacggcaagctccccaaccaccacaaggcctgccaattgtgtcag
tgtcaccctatgggtgctgtgggtcgctggtgtaaccagacatcaggacagtgtttgtgt
cgggatggggtaacaggactgaagtgcaaccgctgcgcccctggctacaaacaggggcgc
tcccccctccggccctgcatccgaatccaggaggtgacagcccccaccacacctgtgtac
cagccccagtacagcatagatgaagagtgtgtatcgtattgccagccatcgctggttaaa
gtgaggatgaacctggagacgtactgtctaaaggactttgtcctgaagctacaggtcaga
gggatggagcgttcaggcccctggtggcagttctccgtctggatccagaccgtgttccgt
acggggtcttcctcccgtgttcgcaggggccctcaggcactctgggttcccgaccgtgac
ctgggctgcggctgccccgccctccaggtgggccgcaccttcctgctgatcggggccgag
gggcgggggcggaactggggcccagaggagagacggctggtcgccgatagatccacactg
gctctccagtggagggagcactggaaccccaaactgagagggttcagggggcaggacaag
aggggccgctgccccccaaaattgcccgggggtgtcgacccccacgggggccactcaaag
caccatcactcagagtacaccccacctcaccttgtgacagagaaagagacagaggtcaag
gtgcacccacacacacattcacattcacacaaaccctcagattctgtgaaagacacggaa
gaggaggcagagaactctgtggcgctggacacacacactcagacacagtcctcctcacac
cacagacctgaaccatcacaatcccaggaacagcaacaggaacagactccatccccctcc
acacccagtctcatatgttccacccagacccctgtctga
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