Coregonus clupeaformis (lake whitefish): 121572255
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Entry
121572255 CDS
T08357
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
cclu
Coregonus clupeaformis (lake whitefish)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
121572255
NCBI-ProteinID:
XP_041740160
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Position
8:58136586..58188292
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AA seq
1153 aa
AA seq
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MSSVCVLKGKAVLWQDSFSPHLRTSTPSMPVVLSSGGHAPPAGQTPHAPPPCQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPPGDNIHDSQVRSMDALNHDFQALALEGRAMGEQL
LTGKKFWESDEAGKDGPKGIFLDQWRDSAWGATDHSVSQPIMVSRRPGGGFHGGGEVGGS
VMSPRSESGGLGVSMVEYVLSSSPAEKLDSCLRKGPYGPRDGEVEEEKREKAKAPFEGEK
LKEMAEGEVDVISDVINPNGLPVQNGLDVEVKEYSRQGQIQPVGPDTDMIGGVGGEGMGS
MGGGGPKPQEDFSGVEQGVTMDNMQSVMEPLQFDYNSQMAMDSQPTVGLFDYSNQQQLFQ
RPSALAAQQQQYALAAAQQSHIGLAQAFVPNPYIISTGPPGTDPYAAGLAAAATLGPAVM
PPQYYGVTPWGVYPANLFQQQATAANNSANQQAQGQNQQNQQQVMRGGGNQRPLTPSQGQ
QGQQNDQLISAAAVNSALAFGQGLAAGVPGYPMLAPAAYYDQTGALVVNTGSRGGPVRLM
APAGSVIISPSAAQAVAAAAAAGGGANGGMGGGANGPFRAMQSQQPQQQGGGAMSGNSFY
GSSSLSNSSQSSSLFSQGSQSMYCSAQPGPGSASLGFGQSSSSLGATLGATLGGFGTAVA
NSSGGSSSRRDSLTGSSDLYKRTQSSLTPIGHGGFYNGTLGFSSSPGPVGMPLPNQGPSH
SLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAPGAEAKYRSASSGSSLFSPSSQLFPSS
RLRYGMSDMMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERASS
AERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSVDQKLAVAERIRGHVLSLALQMYGC
RVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALHFIIDAF
KGQVFALSTHPYGCRVIQRILEHCLPDQTLSILEELHQHTEQLVQDQYGNYVIQHVLEHG
RAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVSHASRAERAVLIDEVCILTEGPHSALY
TMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAKLEKYYMKNGV
DLGPLCGPPNGIM
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgtgtgtgtgctgaagggtaaagcagtgctctggcaggactcgttcagcccc
cacctcagaacttcaactcccagcatgcccgtggtgctgagcagcggaggacacgcccct
ccggccggacagaccccacatgccccgcccccttgccagcagggcgtggcaggtgcgggg
cggtctcaggatgatgccatggtagactacttcttccagcggcagcacggagaacagcct
ggcaaacaccgctggccccctggggataacatccacgacagccaggtgcggtcgatggat
gcgctgaaccatgacttccaggctctggctttagaagggcgtgccatgggagagcagctt
ctgacaggtaagaagttttgggagagtgatgaagctggaaaagatggaccaaaagggatc
ttcctggaccagtggcgggacagcgcatggggggccacagaccactcggtgtctcagcca
atcatggtgtctcgtcggccgggtggggggttccatggtggcggcgaggtgggcgggtca
gtgatgtcaccgcggtcagagagcggggggttaggggtcagtatggtagaatacgtcctc
tcctcctctcccgccgagaaactggactcctgcctccgcaagggaccctacggtccgagg
gatggagaggtggaggaggagaagcgggagaaagcaaaggctccatttgaaggagagaaa
ctcaaggagatggcggagggagaggttgatgtcatcagtgatgtcatcaaccccaacggg
cttcctgtgcagaacggcctggatgtggaagtcaaagagtacagtcgtcaaggccagata
cagcccgtggggccggacactgacatgatagggggtgtaggaggggagggtatgggctcc
atgggaggcgggggtcccaaaccccaagaggacttctctggggtggaacagggcgttacc
atggataacatgcagtctgtgatggagcctctgcagtttgactacaactcccagatggcc
atggactcgcagcctaccgtgggcctgttcgactacagcaaccaacaacagttgttccag
agacccagtgctctagcagcccaacagcagcaatatgccttggcagcagcacagcaatct
cacattggtttggctcaagcgtttgttcccaacccttacatcatcagtaccggtccgcct
ggaacggacccctacgctgctggactggcagctgctgcaactctgggcccagcagtgatg
cctccccagtactacggggtcactccctggggagtgtatccagccaatctgttccagcaa
caggctacagctgccaacaactcagccaatcaacaggctcaaggacagaaccagcagaac
caacaacaggtgatgcgtgggggcggtaaccagcgaccgctgacccctagccaaggtcaa
cagggtcagcagaacgaccagctgatctccgccgcagcagtcaactcagcgctcgccttc
ggacaggggctggctgccggcgtgcctggctatcccatgctggctccagctgcttactat
gaccagacaggggcgctagtggtcaacacaggatctaggggcggacccgtacgcctcatg
gcacccgcggggtctgttattatctctccatccgctgcacaagcagtggcggctgcagca
gctgcgggtggtggggctaacggcggtatgggaggcggggccaatggtccgttccgagcc
atgcaatcccagcagcctcagcagcaggggggaggggctatgtcaggaaactctttttat
ggatcctcctctcttagcaactcctctcagagctcctccctcttctctcaaggtagccaa
tcaatgtactgctccgcccagccgggccctggctccgcctctctgggttttggtcagagc
agctcttcactcggtgcaacactgggagctacgttgggcggctttggtactgcagtggct
aactccagcggtggcagcagttctcgtcgtgactctctgaccggcagtagtgacctgtac
aaacgcacgcagtccagcctcactcccattggccacggggggttctacaacggaaccctg
ggctttagctcctcccccgggccggtcggaatgcccctgcccaaccaaggcccctcccac
tccctaactccacccccctctctgtccaatcacagctcctcatccaacctcaacctggga
ggtctgaccaatggcagcggtcgtttcatctctgctgctccaggggcggaggcgaagtat
cgcagcgcgagttctggctcctccctcttctctcccagcagccagctcttcccgtcgtca
cggctacgctacggaatgtcggacatgatgccgtcagggcggagccggctcctggaagac
ttccggaacaaccgctaccccaacctgcagctgagagagatcgctgggcacatcatggag
ttcagccaggaccagcatggcagcaggtttatccagttgaagttggagagggccagctca
gcagagcgtcagctggtctttagtgagatcctccaggctgcctaccaactcatggtcgac
gtcttcggaaactatgtcatccagaagttctttgagtttggcagtgtggaccagaagctg
gctgtagccgagaggatccggggtcatgtcctgtctctggccctacagatgtacggctgt
agagtcatacagaaggcactggagttcatcccctcagaccaacaagttataagtgagatg
gtacgggagctggacggccatgtgttgaagtgtgtgaaggatcagaacgggaaccacgtg
gtgcagaagtgtatcgagtgtgttcaaccccacgcactacacttcatcatagacgccttc
aagggacaggtgtttgccctctccacccacccctacggttgtagagtgatccagcgtatt
ctagaacactgccttccagaccagaccctgtccattctggaggagctgcaccaacacaca
gaacaactggtgcaggaccagtatggtaactatgtgatccagcatgtgttggaacacggc
agagcggaggataagagcaagatagtagctgagatcagaggaaacgtactggggctcagc
caacacaagttcgccagtaacgtggtggagaagtgtgtgagccatgcgtcgcgtgcggag
cgggccgtgttgatagacgaggtgtgtatcctgacggagggtccccacagcgccttgtac
accatgatgaaggaccagtacgccaactatgtggtgcagaaaatgattgacgtggccgaa
cccacacagagaaagatcgtcatgcacaagatccggccccacatctccactctgaggaaa
tatacgtatggcaaacacatcctggcaaagctggagaaatactacatgaagaatggagtg
gacttgggtcctctctgtggccctcccaacggcatcatgtaa
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