Coregonus clupeaformis (lake whitefish): 121572263
Help
Entry
121572263 CDS
T08357
Name
(RefSeq) upstream-binding protein 1
KO
K09275
transcription factor CP2 and related proteins
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121572263
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Grainyhead
121572263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CP2
SAM_3
Motif
Other DBs
NCBI-GeneID:
121572263
NCBI-ProteinID:
XP_041740175
LinkDB
All DBs
Position
8:complement(60974476..60993383)
Genome browser
AA seq
549 aa
AA seq
DB search
MAWVLKMDDATIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPSDSES
CSPNPPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLELAEINNRSVKSIVR
VVFHDRRLQYTEHQQLEGWKWNRPGDRLLDIDIPLSVGIMEAKANPSQLNAAEFLWDLNK
RASVFVQVHCISTEFTPRKHGGEKGVPFRIQIDTFRQGDSGEYTEHLHSASCQIKVFKPK
GADRKQKTDREKMEKRTSQEKEKYQSSYNTTILSELRLEPIVEEAGDYELKKSSKRTLPA
DCGDSLAKRGSCSPWPDAYVSSPQTAGPSFTSTPLSTYTASSVPDSGSSSPNHQADPVSQ
VVTEQLSPTATIQETQKWLVKNRFNTYARLFSHFSGFDLLKLTRDDLVQICGAADGIRLF
NTLTSRSVRPRLTLYVCQECEVYSPLLERCCDSQNRERGDAPNLYVYHALYLEELTAAEL
IRKMACVCSVPLGQINQVYRQGPSGIHILLSDQMVYNLPDESCFLIGTVKDETGEGLHQM
GEGIHLVLK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcctgggtgctgaagatggacgatgccaccatcgagtcggggctggtacacgacttc
gatgccagtctgtcgggcatcgggcaggagctgggggctggcgcgtacagtatgagtgat
gtgctggccctacccatttttaaacaggaggactccagtcttccttcagacagtgagagc
tgcagtcccaaccctcccttccagtatgttctctgtgctgccacctcccctgctgtcaaa
ctacacgacgagacactcacctacctaaaccaaggccagtcttatgagatccgtatgctg
gacaacagaaagctggagttagcagagataaacaacaggagtgtcaagagcatcgttagg
gtggtgttccatgacaggagactccagtacacagagcaccagcagctggaggggtggaag
tggaatcgccctggagaccgtctcctagacatcgacatccccttgtcagtgggtatcatg
gaagccaaggccaacccctctcagctcaacgctgccgagttcctctgggacctcaacaag
agagcctctgtgtttgtgcaggtccactgcatcagtacagagttcacccctaggaagcat
ggaggggagaagggagttcccttcaggatccagatcgacactttcagacagggcgacagc
ggagagtacactgaacacctccactctgcctcctgccaaatcaaagtcttcaagccaaag
ggggccgacaggaaacagaagactgacagagagaagatggagaaacgaacatctcaggag
aaggagaagtaccaatcctcctacaacacaaccatcctatcagagttgaggctggagcct
atcgtagaggaggcgggagactatgagctgaagaagtccagcaagaggacgctgccggct
gactgtggggactcgctggccaagagaggcagttgttctccatggcctgatgcctacgtc
agctctccccagacagctggcccctccttcacctccacacctctctccacgtacactgcc
tcctccgtacccgacagtggctcctcgtcgcccaatcaccaggcagaccctgtcagccaa
gtcgtcacagagcaactcagtcctacagctaccatccaggagactcagaagtggcttgtc
aaaaaccgcttcaacacctacgcacgactcttctcccacttctcaggttttgacttatta
aagttgacccgggacgacctggttcagatctgtggagctgctgatgggatcagactcttc
aacacactaacatccaggtcggtgcgtcccaggttgaccctctatgtgtgtcaggagtgt
gaggtgtatagccccctgctggaaagatgctgtgacagccagaacagagagcgcggtgac
gcacctaatttatacgtgtaccatgctctgtacctggaagagctgactgcggctgagttg
atcaggaagatggcgtgtgtgtgtagcgttccactgggacagatcaaccaggtctaccgg
caaggaccctcaggaatacacatactgctgagtgaccagatggtttacaacttacctgac
gagagctgctttctcatcggcacagtcaaagatgaaacgggggaggggctccaccaaatg
ggggaggggattcacctggttttgaagtag
DBGET
integrated database retrieval system
