Coregonus clupeaformis (lake whitefish): 121572264
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Entry
121572264 CDS
T08357
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121572264
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121572264
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121572264
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
121572264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
TOR1L1_N
Cnd1
ParcG
HEAT_DAAF5
IFRD
MMS19_C
Motif
Other DBs
NCBI-GeneID:
121572264
NCBI-ProteinID:
XP_041740177
LinkDB
All DBs
Position
8:complement(61004813..61102944)
Genome browser
AA seq
1535 aa
AA seq
DB search
MEEHDNMDYFYQQILQKDVTRRLQVGQDLIDYLNDPQRSSDVEQDKPRLDKTIDELTGWV
NSSNYKVALLGIDIAGAFVDRLGEHFRGYLGTVVPALVDRLGDSKDQVRDQSQNLILRCM
EVTASPMYVWERLLPGFKHKNLRSREGVCLVLCATLNMYGAQPLSLSKIVPHLCTLTGDQ
NPQVREAATASLVDVYRHVGERVRADLGKRGLPAARLQMIYGRFDEALNSGNMALSPSHD
RSFEDDADSADGNRAQAAFKVPKVPKKPAESSTARRPSTTGSKIGGASKDGAGGIDEEDF
IKAFTDVPTVQIYSSRDLEDNLNKIREICSDDKHDWDQRAAAMKKIRSLIVAGATEYECF
YQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEGILPVLFNLIPNCA
KVMATSGVSAIRFIIRHTHVPRLIPLITSNCTCKSVAVRRKCFDFLDLLLQEWQTQTLER
HTAVMVASIKKGIADADAEARVEARKAYWGLRNHFPGEADSLFNSLEPSYQKSLQSSLKS
SGSVTSLPQSDRSSSSSQESLNRPLSSKWSAAPGRVPAGHKGGASPGSLQRSRSDVDVNA
ATVAKQRHIGHVGAGRLTPSSYSSLDDASDKTDGRLRTKQPLTTATSISQVDSRGRARTK
MVSQSQRSYESDCTPGSQSATPVAGSRSGSPGRVLTSTALSTLGSGAQRVLAGAVGAGTG
GRRSRIPRSQGCSRDSSPTRLSVAPSSISSIYKGASRGARGSRIPRPSMSQGCSREASRE
SSRDTSPVRSFTPLASRHYSRSTGALHTADALGAAGSGYSISHLPSSVSAMRVLNTGSDI
EEALADALLLGDMRSKTKPARRRYENYGMCSDDDANSDASSACSERSYGSRNGGAIPTYM
RQTDDVAEVLNRCASANWSERKEGLLGLQALLKNQCTLSRVELKRLCEIFTRMFADPHSK
RESGSRVFGTAESGVSSASFKRVFSMFLETLVDFVLVYKEDLQDWLFVLLTQLLKKMGAD
LLGSVQAKVQRALDITRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYIETLTLQME
PQDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLAALPKTFQ
DGATKLLQNHLRNTGNTAQAPMGSPLTRHTSRSPASWSSPLTSPTKTSQNTSSPSAFDYD
TENMNSEDIYSSLRGVTEAIQNFSVRSQEDMNQTGGGADQVDGGRTALDNKTSLLNTPLL
SSSPRASRDPFIDSPFKHSVKDISLEESDQQTDDRSIDQSELVSELLKELSNHNERVEER
KVALCELLKLIRENTLQVCWDEHFKTILLLLLETLGDREHVIRELALRVLREILSRQPWR
FKNYAELTIMKALEAHKDPHKEVARAAEETAAMLASSISPDQCIKVLCPIIQSADYPINL
AAIKMQTKVIERVPHHGLVSMLPEIVPGLIQGYDNSESSVRKACVFCLVALYAVIGEELK
PHLNQLSGSKLKLLNRYIQRAQSGSSGGEPPADNL
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcatgacaacatggattatttttaccagcagatcctgcagaaagacgttacc
cgcaggctgcaggtcgggcaggacctcatagactacctgaacgacccgcagaggtcctcc
gatgtggagcaagacaaaccccgactggataaaaccatagatgagctgacgggatgggtc
aactccagcaactacaaggtggcattgttggggatagacattgccggggcgttcgtcgat
cgtctgggggaacactttagaggatacctggggacagtggtcccagccttagtggacagg
ttgggggacagtaaggaccaggtccgagaccaaagtcagaatctcatcctccgctgtatg
gaagtgaccgcatcgcctatgtatgtgtgggagaggttgcttcctggttttaaacataag
aacctccgcagcagagagggggtgtgtctggttctctgcgccaccctcaacatgtatggt
gcccagccattgagtctcagtaagatcgttccccacctctgcactctgactggagatcag
aacccacaggtccgggaggctgccacagcgtccctggtggatgtatatcgccacgtagga
gagcgagtcagagccgatctgggaaagagaggccttcctgccgcacggttacagatgata
tatgggcgttttgatgaagcgttgaattctgggaacatggcgcttagccccagtcacgac
cgtagttttgaggatgatgcggacagtgcagatgggaaccgtgctcaggctgccttcaaa
gtccccaaggtccccaagaagccggcagagtcctctactgcacgcagacccagcactacg
ggttccaagatcggaggtgcgtctaaggatggagccgggggcatcgatgaggaagacttc
atcaaagctttcactgacgtccccacagtacagatctactcatctcgtgacctggaggat
aacctgaacaagatcagagagatctgttctgatgacaaacatgactgggaccagagagcc
gccgcaatgaagaagatccgctcgctgattgttgccggggcgacggagtacgagtgtttc
taccagcacctgaggctgttggacggagcgttcaaactgtcagctaaagacctccgatca
caggtggtacgggaggcctgcatcactgtggcccacctgtcgacagtgttaggtaataag
tttgaccatggagccgagggcattcttcctgtcctgttcaacctcatccctaactgtgcc
aaggttatggccacatcaggagtctctgctatacgctttatcatacggcacacacacgtt
cccagactcattcccctgatcaccagtaactgcacctgcaagtctgtggccgtcagaagg
aaatgctttgacttcctggacctgctgctgcaggagtggcagacccagactctggagagg
catacagcggtgatggtagcgagcattaagaagggaatcgcagatgccgacgcagaggcc
agggtagaggcacgcaaggcatactggggtcttaggaaccatttcccaggggaggcggac
tctctgttcaactcgttagaaccgtcctatcagaagagcctccaatcgtctctcaagagt
tccgggagcgtgacgtctcttcctcagagcgaccgctcctcttcctcatcacaggagagc
ctcaatcgtcctctgtcatctaaatggtcagccgctcctggaagagtcccggcgggtcat
aagggcggggcgtcgccgggctccctgcagcgttcccgtagcgatgtggatgttaatgcg
gcaacggttgctaagcagcggcacatcgggcatgtgggggcggggagactgacccccagc
tcctactcctcattggatgatgcctctgataaaacagatggccgtctgaggaccaagcag
cctctcaccacggcaacaagcatcagccaggtggactcccggggacgcgcccgcaccaag
atggtgtcccagtcacaacgttcctacgaatcagattgcacaccaggatctcaatctgct
acccccgttgccggcagtcggagtggttccccgggccgtgtcctgaccagtacagctctg
agtacgctgggttctggagcccagagggtcctagccggggccgtaggggctgggacggga
gggagacgtagccgcatcccccgcagccagggctgctcacgagactcctcccctacacgc
ctgtctgttgctccttccagtattagttccatctacaaaggagcgagcagaggagctcgg
ggcagtcgtatccctcggcccagtatgagtcagggctgtagcagggaggccagcagagag
agcagcagagacaccagccctgtacgctcctttacacccctggcgtcgcgccactactct
cgctccacgggagctctccacaccgccgatgctttaggggccgcagggtcaggctacagt
atcagtcatctgccgtcgtccgtcagcgccatgagagtcctcaacacaggatctgatata
gaggaggccctcgccgacgccctgctgttgggggacatgagatccaagacgaagccagcg
cgccggcgctatgagaactatgggatgtgttcggatgatgacgctaacagtgacgcgtcc
agcgcctgctcagagcgctcctacggctccaggaacggaggggccatcccgacgtacatg
agacagactgacgacgtggccgaggtgttgaaccgctgtgccagtgctaactggtcggag
aggaaggaggggcttctgggtctacaggctctactgaagaaccaatgcaccctcagtcgt
gtggagctgaagaggttgtgtgaaatcttcaccaggatgtttgcagacccccacagtaag
cgagaatccggatctagggtctttggaacggcagaatccggtgtaagctcagcctccttc
aagagagtgttcagtatgttcttggagacccttgtggactttgtcctggtgtataaagaa
gacctgcaggactggctgttcgtcctgctcacccagctgctgaagaagatgggagctgac
ctactgggatcagtacaggccaaggtccagagagcactggacatcacacgagagtctttc
cccaacgacctccagttcactatcctcatgaggttcactgtggaccagactcagacaccc
aacctcaaggtgaaggtggccattctgaagtacattgagaccttgaccctgcagatggag
cctcaggactttgtgaactccagtgagacgcgcctggctgtgtctcgcatcatcacctgg
accacagagcccaagagctccgacgtcaggaaggcggcccagtcggtactcatctcattg
ttccagttgaacactccagagttcaccatgctgctggcagccctgcccaagaccttccag
gacggagccaccaaactgctacagaaccacctgaggaacaccggcaacactgcacaggcc
ccgatgggaagtcctctgacacgccacacctcccgctctcctgccagctggtccagcccc
ctcacctctcctaccaaaacatcacagaacacatcctcacccagtgcgtttgactacgac
acggagaacatgaactctgaggacatctacagtagtctgagaggagttacagaggccatc
cagaacttctccgtccgcagccaggaagacatgaaccaaacgggtggtggtgctgaccag
gtggatggaggccgtactgctctggacaacaagacatctcttctcaacacccccctgctc
tcctcttctccccgggcatcccgagacccctttatagactccccctttaaacacagcgtc
aaagatatttcactggaagaatcagaccagcaaactgatgaccgcagcattgaccaatcg
gagctggtgtctgagctgctgaaggaactgtccaatcacaatgagcgcgtggaggagagg
aaggtggcgctttgtgagctcttgaagctgattcgtgaaaacaccctgcaggtctgctgg
gacgaacacttcaaaaccatcctcctgttactactggagacgctgggagacagggagcat
gtgatcagggagttagctctgcgtgttctgagggagattctgagccgccagccctggagg
tttaagaactatgctgagctcaccatcatgaaggccctggaggcacacaaggacccacac
aaagaggtggcgcgtgctgcagaggagactgcggccatgctggcgtcgtccatcagtcca
gaccagtgtatcaaggtgttgtgtcccatcatccagtcagctgactaccccatcaacctg
gctgccatcaagatgcagactaaagttatagagcgggtcccccaccatggactagtcagc
atgctgcctgagatcgtccccggactcatacagggttatgacaactctgagagcagtgtg
aggaaggcctgtgtattctgtctggtggccctctacgcagtcataggggaggagctaaaa
cctcacctcaaccaactgtctggcagcaagttgaagttgttgaatcggtacatccagcgt
gcccagtccggctccagtggtggtgagcccccagcagacaacctatag
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integrated database retrieval system
