Coregonus clupeaformis (lake whitefish): 121572272
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Entry
121572272 CDS
T08357
Name
(RefSeq) sorting nexin-13
KO
K17925
sorting nexin-13
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121572272
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121572272
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
121572272
NCBI-ProteinID:
XP_041740224
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Position
8:complement(61460711..61509893)
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AA seq
955 aa
AA seq
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MFAEASLSVWGWGGLGVVLFLITFGPFAIFYLAFYICCFVGGGFAVTLLFGKTNSERHLE
KCEHSYLPATQTGILKTLDELRLAPKPIKIDRRLTGSNYIDEPLQQVILFALRDYIQYWY
YALSEDESFLLEIRQTVQNALVQFSTRSKDVDWQPYLTTRLVDDFATHLRVFRKAQDRLE
GREDNKQRDLSEEMVESFFEAEVEMERNICRDVVCTSLKDEEGFLRDLCEVLLYLLLPPG
DFHNKNMRYFLREILAQGVLLPLVNQLSDPDYVNQFVIWMIRDSSCNYEAFLNVLKLTDR
VSELEAVKDKALGELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRIQRLQSGKEVDA
LKLAANFGKLCIIPLEHILVHNIALQFFMDYMLAAGAQAELFFWLTVEGYRVTAQQQLEV
MEVRQKEGKKGGSTKGLLKAAALGVYEQYLSDKASPRVQVEEVSVLKLGEKLQKVGDPTP
EIFDDIQRKVYDMMLRDERYYPSFKQSPLYIRMLAELDMLKEPSYRGSDDGDGESFNGSP
TGSINLSLDDLSNSCHDDNIQLHAFISDTGVCNDHGKTYALYAITVLRRNHDGSEDSWKT
YRRYSDFHDFHMRITEQFENLTSILKLPGKKTFNNMDRDFLEKRKRDLNSYLQLLLNPEM
VKACPTLVPYVYDFLENKQYSKGKGDFARKMDTFVNPLRSSMRNVSIAVKGLPDSLAEGM
NKAADNMGRMSEKLGHELKQSVFKVPPLLPKSDIDPEHCRVSAQLDDNVDDNIPLRVMLL
LMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDFMTAPEQVADYVKKFR
DSYWPNGILAESPPRRDKNIRMRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVFDMF
QHGPMNRRLVYVLLEGFLETMFPHYKFPELFVKLHSRSPRTARYTQKLKSTSLKR
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggccagtctgtctgtgtggggatgggggggtctaggagtggtgctgttc
ctcatcactttcggacccttcgctatcttctacctggccttctatatctgctgcttcgta
ggaggtggttttgcggtcactctgttgtttgggaagaccaactcagagagacatctagag
aagtgtgaacactcctaccttccggccacgcaaacgggtatactgaagacgttggatgag
ctgaggttggctccgaagcctataaagatagacaggagactgactggctccaactacata
gacgagcctctgcaacaggtcatcctgtttgcattgagagattatatccagtactggtat
tacgctctgagtgaggatgagtcttttctgctggaaatcagacagactgtccagaacgct
ctggtccagttctctacacggtctaaagatgtagactggcagccttatttgaccaccaga
ctggtggatgacttcgctactcaccttcgagtcttcagaaaggcccaagacagactggag
ggcagggaagacaataaacagagggacttgtcggaggagatggtggagtcgttctttgag
gcggaggtggagatggagaggaacatctgtagagacgtggtctgcacctccctgaaggat
gaagaagggttcctgagggatctgtgtgaggtgctgctgtatctgttactacctcctgga
gacttccacaacaagaacatgagatatttcctcagggagattctggcgcaaggcgttctc
cttccactggtcaaccagctgagtgatcctgattacgtcaaccagtttgttatctggatg
atccgggactctagctgtaactacgaggcgtttctgaacgtcttgaagctgacagacaga
gtgtctgagctggaggctgttaaagacaaggctctgggagaactacagtacctacgatca
ctggacaccgcaggagacgatatcaatgtaataaagaaccagatcaacagtctgttgttt
gtgaagaaggtctgtgagaccaggatacagaggctacagtctgggaaggaggtggatgct
ctgaaactagcggctaacttcggcaagctgtgtattataccgctggaacacatccttgta
cacaacatcgccctgcagttctttatggactacatgctggcggctggggcccaggcagag
ctgttcttctggctgacagtggagggctacagagtaacagcccagcaacaactagaggtg
atggaggtacggcagaaggagggaaagaagggaggatccactaaaggattgctgaaggct
gcagcactaggggtgtatgagcagtacctgtctgataaggcgtcccccagggtgcaggta
gaggaggtgtctgttctcaaactgggagagaagctacagaaggtcggtgaccccacgcca
gagatattcgacgacatccagagaaaggtgtatgacatgatgcttcgtgatgagaggtac
tacccttcattcaaacagagtcctctctacatcaggatgttagctgagctggacatgctc
aaagaaccctcctatagaggatcagatgacggagacggagaatcgttcaacggttctcca
acaggaagcattaatctatctctggatgacctgtcgaactcctgccatgacgacaatata
cagctacacgccttcatctctgatacaggggtatgtaatgaccacggaaagacctacgcc
ctctacgccatcactgtgttgcgccgtaaccatgacggcagcgaagactcctggaagacc
taccgacgctactctgacttccacgactttcacatgaggatcacggagcagtttgagaat
ttgacgtcgatcctgaagctgccggggaagaagacgttcaacaacatggacagagacttc
ctggaaaagagaaaaagagacctgaactcgtacttacagctgctgctgaatccagagatg
gtgaaggcctgtcctactctggtcccatacgtctacgacttcctggagaataaacagtac
agcaaggggaagggagacttcgcacgcaagatggatacgtttgtgaacccactgcgtagc
tcgatgcgtaacgtgtccatcgctgtgaagggcctgccagacagtctggctgagggtatg
aacaaggctgctgacaacatgggacgcatgtctgagaagctgggacacgaactcaaacag
tccgtgttcaaggtgcctccactgctccccaagtctgacattgacccagagcactgccga
gtctcggcccagctggacgacaacgtggatgataacatccccctgcgtgtgatgctgttg
ctgatggatgaggtgtttgacctgaaggagaggaaccagtggctccgcaggaacatcaag
aacctgctgcagcagctcatcagagccacatacggagacactatcaacaggaagatcgtg
gatcatgtggacttcatgacagctccagaacaggtagcagactacgtcaagaagttcagg
gattcgtactggcccaacggaatcctggcagagtctccaccccgccgggacaagaacatc
cgcatgaggacgcgggtcgccgccaagaccaacctattgggaatcatgccagatgagttg
aagcacatcatcggggcggatacgactcgtaagggcatcctgcgtgtgtttgacatgttc
caacatggaccaatgaaccgccggctggtctacgtgctcctagaagggttcctggagacc
atgttccctcactacaagttccctgagctgtttgtcaaacttcactctcgctcgccgcgc
acagccagatacacacagaaactcaagagcacctccctgaagaggtga
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