Coregonus clupeaformis (lake whitefish): 121572280 Help Entry 121572280         CDS       T08357                                  Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:cclu00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     121572280  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cclu03021]     121572280    03036 Chromosome and associated proteins [BR:cclu03036]     121572280 Transcription machinery [BR:cclu03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      121572280 Chromosome and associated proteins [BR:cclu03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     121572280    PBAF complex     121572280    GBAF(ncBAF) complex     121572280 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_1 SWIRM Myb_DNA-binding SWIRM-assoc_3 Myb_DNA-bind_6 DUF919 Omp_AT Motif Other DBs NCBI-GeneID:  121572280 NCBI-ProteinID:  XP_045078069 LinkDB All DBs Position 8:61908374..61931345 Genome browser AA seq 984 aa AA seqDB search MATASGGPNLVAPGTSQSPRTTTAQRKKNGNLSARFWESPDTLAQLETVRQWIGKHYKKY VQADSPSCPALVSLTLQLLQFQEEVLGRSADKPTLTKLPSQCFLDLLPGGGLCHILGSAY KFKMDQGWRRFDLQNSSRTDHNLEMFTTLEKNLVQNSCLSRPVVYVDQEVDQNLNSRLAD IITKHQGSLTEDRTQASHHIYPRPAVTDHDEWVRPIMRKNKHVLVHWGRHPDSYDSWLSS SDVEGEVEEPPHTHRPWRVHAGWVLDTEVYNEWMNEEDYLVNDRNVPLILRRRVHLTDQQ DLKFTPVKKRIRSPSPPSSDGRKKGGKKSGGSKRRGPKEEEEVVEEDLTKDMEDPTPVPN MEEIVLPKNVNPKKDSENTPVKGGVMTDLDEIEDDSLLPGGREDDEEGREGLRLSDGEDN ITEQTHHIIVPSYTAWFNYNCIHQIEKRALPEYFNGKNKSKSPEIYLAYRNFMIDSYRLN PQEYLSSTSCRRNLTGDVCAVMRVHALLEQWGLVNYQVDAEIRPLPMGPPPTPHFNTLAD TPSGLAPLQHRPLQVSYSQQMLFFPERSVEKPSDSQNFGLRTDLYTRKHPKSKGTSSGRD WTEQETLLLLEALEVYRDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSASSLGPLA YQPVPFSQSENPVMSTVAFLASVVDPRVAAAAAKAALEEFCRVREEADKVLEFPALKEAE KTGYLSLALSPVDVMDGENMESDSDSQQHLQADGQKVPEPSRGERAEGERVKRENTETTV TEERDGERGEENKTDQGEEEELVGGGRDEGRRRAELEFVDGTVVKAAAAALASAATKAKH LSAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQSFH SEQLKHAEMRILQQREQQSPYALQQHTGQSMPGRIMPTEGNSLTMAPRHPGASNGMYPPA QPDGIAPAQPGPPTTAIHSRGADT NT seq 2955 nt NT seq  +upstreamnt  +downstreamnt atggcgacagcgtctggaggaccgaatcttgtggctcctgggaccagccagagtccacgc accaccacagcacagcgaaagaaaaacggaaatctgtccgcgaggttttgggagagcccc gataccctggctcagctcgagactgtccgacagtggatcgggaagcactacaaaaagtat gtgcaggcagactctccatcctgcccggctctagtatccctcacactgcagctgctacag ttccaggaagaggtccttggcagaagtgcagacaaacccacactcaccaagctaccttct cagtgcttcctggacctgctgcctggaggcgggctttgccacatccttggctccgcctac aagttcaagatggatcagggctggagaaggtttgacctacagaactcctctaggacggac cataacttagagatgtttactaccctggagaagaacctggtccagaatagctgtctttcg aggcccgtggtgtatgtggaccaggaggtggatcagaacctgaacagcagactggctgac atcatcaccaaacaccagggttcgttgactgaggacagaacccaggcctctcaccacatc tacccccgtccagccgttacagatcacgatgagtgggtgcgtcccatcatgcggaaaaac aagcatgtgttggtgcactggggaaggcaccctgacagctacgatagctggctgtcctct agtgatgtagagggagaggtggaggaaccaccacacacacacagaccttggagggtgcat gcaggctgggtgttggatacggaggtgtataatgaatggatgaatgaagaagactacttg gtaaatgacagaaacgttcctctcatcctccgccggagagtccacctcacagaccaacag gaccttaagtttactccagtgaagaagagaatacgctccccctctcctccctcttccgac ggcagaaagaaaggaggaaagaagagtggtgggtctaagaggcgtggcccaaaggaggaa gaggaggtggtagaggaggatctgactaaagatatggaggatccaacacctgtccctaat atggaggaaattgtactgcctaagaatgtaaacccgaagaaggacagtgagaacactcct gtcaaaggaggggtgatgactgacctggatgaaatcgaggatgactctttgcttcctgga ggaagggaggatgatgaggagggcagagaagggctgcgtctatcagacggagaagacaac atcacagaacaaacacaccacattatcgtcccctcctacactgcctggttcaactataac tgtattcaccagatcgagaaacgagcgctaccggagtactttaacggaaagaacaagtcc aaatctccagagatatacctggcgtaccgtaacttcatgatcgattcgtaccggctgaac ccccaggagtacctcagctccacctcctgcagaaggaacctgacgggagacgtctgcgcc gtcatgagggtccatgcgttgttggagcagtgggggttagtgaactaccaggtggatgca gagatcagacctctccctatgggaccccctcccacccctcacttcaacacactggctgat acaccctcaggactggccccgctacagcacagaccactacaggtgtcctactcccagcag atgttgttcttcccagagaggagtgtagagaagccctcagactctcagaactttggcctc agaacagacctgtacaccaggaaacacccaaagagtaaaggaaccagttcagggagggat tggacagaacaggagaccctcctactgttggaggcattagaggtgtatagagatgactgg aacaaggtgtccgaacacgtagggtctcgtacccaggatgagtgcatccttcacttcctg cgtctgccaatagaagacccctatctggaggactctgcctcctcactcggcccattggcc taccagcccgttcccttcagccagtcagagaacccagtgatgagcactgtggcgttctta gcatccgtggtcgatcccagagtcgccgctgccgccgccaaggctgccctagaggagttt tgtcgtgtccgtgaggaggctgacaaggttctggagttccctgccctcaaggaggctgag aagacaggctacctctctctcgctctctctcctgtagacgtgatggatggtgagaatatg gagtcggactctgactcccagcagcatctgcaggcggatggacagaaggttccagagccc agcagaggagagagagcagaaggagagcgagtgaagagagagaacactgaaacgactgtc acagaggagagagacggagagagaggagaggagaacaagacagaccaaggggaggaggag gagcttgtggggggagggagggatgaagggaggagacgggcagagctggagtttgtagac gggaccgttgtcaaggcagcagctgctgctctggcctccgccgctactaaggccaagcac ctgtcagcggtagaggagaggaagatcaagtctctggtggctctgctggtggagactcag atgaagaagctggagatcaaactgagacattttgaggagctggagactatcatggaccga gagaaagaggcgttggagcagcagcgtcagcagctgttgtcagagcgacagagtttccac tccgagcagctgaaacacgcagagatgaggattctacagcagagagagcagcaatcacca tacgctctacaacagcacacaggccagtccatgcccggccggattatgcctactgaaggg aactctctcaccatggccccccgacaccctggagcttccaatggcatgtacccacctgcg cagcctgatgggatagctccggcccagcctggtcctccaaccacggccatacacagccgg ggagccgacacatga

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